RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 CXorf40AQ8TE69 158 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 STK32AQ8WU08 396 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 ISG20Q96AZ6 181 aaKnown RBP17.75■□□□□ 0.43
SSBP4-207ENST00000600244 SIK2Q9H0K1 926 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 TMEM168Q9H0V1 697 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 TRIT1Q9H3H1 467 aaKnown RBP17.75■□□□□ 0.43
SSBP4-207ENST00000600244 COX16Q9P0S2 106 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 OR1A2Q9Y585 309 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 ACTL7AQ9Y615 435 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 MTORP42345 2549 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 GPR3P46089 330 aa17.74■□□□□ 0.43
SSBP4-207ENST00000600244 PAK1Q13153 545 aa17.74■□□□□ 0.43
SSBP4-207ENST00000600244 NADK2Q4G0N4 442 aa17.74■□□□□ 0.43
SSBP4-207ENST00000600244 LRRC73Q5JTD7 316 aa17.74■□□□□ 0.43
SSBP4-207ENST00000600244 SASS6Q6UVJ0 657 aa17.74■□□□□ 0.43
SSBP4-207ENST00000600244 FAM129CQ86XR2 697 aa17.74■□□□□ 0.43
SSBP4-207ENST00000600244 DEFB106AQ8N104 65 aa17.74■□□□□ 0.43
SSBP4-207ENST00000600244 PDCD6IPQ8WUM4 868 aaKnown RBP17.74■□□□□ 0.43
SSBP4-207ENST00000600244 NELFBQ8WX92 580 aa17.74■□□□□ 0.43
SSBP4-207ENST00000600244 KLHL32Q96NJ5 620 aa17.74■□□□□ 0.43
SSBP4-207ENST00000600244 SLC2A13Q96QE2 648 aa17.74■□□□□ 0.43
SSBP4-207ENST00000600244 SPON2Q9BUD6 331 aa17.74■□□□□ 0.43
SSBP4-207ENST00000600244 TM6SF2Q9BZW4 377 aa17.74■□□□□ 0.43
SSBP4-207ENST00000600244 PDP2Q9P2J9 529 aa17.74■□□□□ 0.43
SSBP4-207ENST00000600244 PCDHB4Q9Y5E5 795 aa17.74■□□□□ 0.43
SSBP4-207ENST00000600244 ILVBLA1L0T0 632 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 TRIM49BA6NDI0 452 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 TMEM202A6NGA9 273 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 RHPN2P1A8MT19 583 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 E5RJQ4 531 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 I6L893 689 aaPredicted RBP17.73■□□□□ 0.43
SSBP4-207ENST00000600244 UGT2B4P06133 528 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 MPSTP25325 297 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 ERCC5P28715 1186 aaPredicted RBP17.73■□□□□ 0.43
SSBP4-207ENST00000600244 CSF2RBP32927 897 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 STAT5AP42229 794 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 PMS2P54278 862 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 MC2RQ01718 297 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 TYRO3Q06418 890 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 LRMPQ12912 555 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 INPP5JQ15735 1006 aaPredicted RBP17.73■□□□□ 0.43
SSBP4-207ENST00000600244 STX1AQ16623 288 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 TMEM52BQ4KMG9 183 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 NKAIN2Q5VXU1 208 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 KLHL10Q6JEL2 608 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 KDELC2Q7Z4H8 507 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 WRAP53Q9BUR4 548 aaKnown RBP17.73■□□□□ 0.43
SSBP4-207ENST00000600244 FGF22Q9HCT0 170 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 ANLNQ9NQW6 1124 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 SPATS2LQ9NUQ6 558 aaKnown RBP17.73■□□□□ 0.43
SSBP4-207ENST00000600244 ANO10Q9NW15 660 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 TMEM9Q9P0T7 183 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 ZNF212Q9UDV6 495 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 RWDD2AQ9UIY3 292 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 CTNND2Q9UQB3 1225 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 POLHQ9Y253 713 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 COQ6Q9Y2Z9 468 aa17.73■□□□□ 0.43
SSBP4-207ENST00000600244 BICDL2A1A5D9 508 aa17.72■□□□□ 0.43
SSBP4-207ENST00000600244 SYCE3A1L190 88 aa17.72■□□□□ 0.43
SSBP4-207ENST00000600244 ZW10O43264 779 aa17.72■□□□□ 0.43
SSBP4-207ENST00000600244 HNRNPRO43390 633 aaKnown RBP17.72■□□□□ 0.43
SSBP4-207ENST00000600244 STK17BO94768 372 aa17.72■□□□□ 0.43
SSBP4-207ENST00000600244 DLGAP3O95886 979 aa17.72■□□□□ 0.43
SSBP4-207ENST00000600244 DENND1BQ6P3S1 775 aa17.72■□□□□ 0.43
SSBP4-207ENST00000600244 ZNF783Q6ZMS7 281 aa17.72■□□□□ 0.43
SSBP4-207ENST00000600244 TFAP2DQ7Z6R9 452 aa17.72■□□□□ 0.43
SSBP4-207ENST00000600244 APLFQ8IW19 511 aaPredicted RBP17.72■□□□□ 0.43
SSBP4-207ENST00000600244 KIAA1524Q8TCG1 905 aa17.72■□□□□ 0.43
SSBP4-207ENST00000600244 MARVELD3Q96A59 401 aa17.72■□□□□ 0.43
SSBP4-207ENST00000600244 CTRCQ99895 268 aa17.72■□□□□ 0.43
SSBP4-207ENST00000600244 DPYSL5Q9BPU6 564 aa17.72■□□□□ 0.43
SSBP4-207ENST00000600244 OSBPL1AQ9BXW6 950 aa17.72■□□□□ 0.43
SSBP4-207ENST00000600244 MRPL40Q9NQ50 206 aaKnown RBP17.72■□□□□ 0.43
SSBP4-207ENST00000600244 MPP6Q9NZW5 540 aa17.72■□□□□ 0.43
SSBP4-207ENST00000600244 PCDHB3Q9Y5E6 796 aa17.72■□□□□ 0.43
SSBP4-207ENST00000600244 TNRC6AQ8NDV7 1962 aaKnown RBP17.71■□□□□ 0.43
SSBP4-207ENST00000600244 KRIT1O00522 736 aa17.71■□□□□ 0.43
SSBP4-207ENST00000600244 POP4O95707 220 aaKnown RBP17.71■□□□□ 0.43
SSBP4-207ENST00000600244 FGF1P05230 155 aa17.71■□□□□ 0.43
SSBP4-207ENST00000600244 OR1E1P30953 314 aa17.71■□□□□ 0.43
SSBP4-207ENST00000600244 FKBP3Q00688 224 aaKnown RBP17.71■□□□□ 0.43
SSBP4-207ENST00000600244 AGERQ15109 404 aa17.71■□□□□ 0.43
SSBP4-207ENST00000600244 MYLK3Q32MK0 819 aa17.71■□□□□ 0.43
SSBP4-207ENST00000600244 PRR30Q53SZ7 412 aaPredicted RBP17.71■□□□□ 0.43
SSBP4-207ENST00000600244 TMEM71Q6P5X7 295 aa17.71■□□□□ 0.43
SSBP4-207ENST00000600244 CEACAM20Q6UY09 585 aa17.71■□□□□ 0.43
SSBP4-207ENST00000600244 C11orf57Q6ZUT1 292 aaPredicted RBP17.71■□□□□ 0.43
SSBP4-207ENST00000600244 RYBPQ8N488 228 aaPredicted RBP17.71■□□□□ 0.43
SSBP4-207ENST00000600244 TTC13Q8NBP0 860 aa17.71■□□□□ 0.43
SSBP4-207ENST00000600244 OR56A4Q8NGH8 313 aa17.71■□□□□ 0.43
SSBP4-207ENST00000600244 TSG101Q99816 390 aa17.71■□□□□ 0.43
SSBP4-207ENST00000600244 ZPBPQ9BS86 351 aa17.71■□□□□ 0.43
SSBP4-207ENST00000600244 ATP13A1Q9HD20 1204 aa17.71■□□□□ 0.43
SSBP4-207ENST00000600244 FBXO8Q9NRD0 319 aa17.71■□□□□ 0.43
SSBP4-207ENST00000600244 SNX10Q9Y5X0 201 aa17.71■□□□□ 0.43
SSBP4-207ENST00000600244 RPS6KL1Q9Y6S9 549 aa17.71■□□□□ 0.43
SSBP4-207ENST00000600244 PCNX1Q96RV3 2341 aa17.71■□□□□ 0.43
SSBP4-207ENST00000600244 MED13LQ71F56 2210 aa17.7■□□□□ 0.42
SSBP4-207ENST00000600244 AKAP9Q99996 3911 aa17.7■□□□□ 0.42
SSBP4-207ENST00000600244 IGLV3-10A0A075B6K4 115 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms