RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 GYG2O15488 501 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 PIGNO95427 931 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 SLC4A1P02730 911 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 APOA4P06727 396 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 LINC00271P0C7V0 271 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 SLC8A1P32418 973 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 RFC2P35250 354 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 POLD2P49005 469 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 TIAL1Q01085 375 aaKnown RBP eCLIP14.53□□□□□ -0.08
VRK3-217ENST00000599538 E2F5Q15329 346 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 RPS27LQ71UM5 84 aaKnown RBP14.53□□□□□ -0.08
VRK3-217ENST00000599538 TDRD5Q8NAT2 981 aaKnown RBP14.53□□□□□ -0.08
VRK3-217ENST00000599538 RDH11Q8TC12 318 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 FAM136AQ96C01 138 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 DRC3Q9H069 523 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 STOML2Q9UJZ1 356 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 VWA7Q9Y334 891 aa14.53□□□□□ -0.08
VRK3-217ENST00000599538 TMEM114B3SHH9 223 aa14.52□□□□□ -0.09
VRK3-217ENST00000599538 TGM5O43548 720 aa14.52□□□□□ -0.09
VRK3-217ENST00000599538 ZMPSTE24O75844 475 aa14.52□□□□□ -0.09
VRK3-217ENST00000599538 TMCC1O94876 653 aa14.52□□□□□ -0.09
VRK3-217ENST00000599538 CCDC166P0CW27 439 aa14.52□□□□□ -0.09
VRK3-217ENST00000599538 CD1EP15812 388 aa14.52□□□□□ -0.09
VRK3-217ENST00000599538 HDCP19113 662 aa14.52□□□□□ -0.09
VRK3-217ENST00000599538 CLCN5P51795 746 aa14.52□□□□□ -0.09
VRK3-217ENST00000599538 BBS5Q8N3I7 341 aa14.52□□□□□ -0.09
VRK3-217ENST00000599538 RMDN1Q96DB5 314 aa14.52□□□□□ -0.09
VRK3-217ENST00000599538 TDRD1Q9BXT4 1180 aaKnown RBP14.52□□□□□ -0.09
VRK3-217ENST00000599538 OSBPL1AQ9BXW6 950 aa14.52□□□□□ -0.09
VRK3-217ENST00000599538 MRPL46Q9H2W6 279 aaKnown RBP14.52□□□□□ -0.09
VRK3-217ENST00000599538 DENND2DQ9H6A0 471 aaPredicted RBP14.52□□□□□ -0.09
VRK3-217ENST00000599538 GPAMQ9HCL2 828 aa14.52□□□□□ -0.09
VRK3-217ENST00000599538 SCUBE2Q9NQ36 999 aa14.52□□□□□ -0.09
VRK3-217ENST00000599538 DNAJC28Q9NX36 388 aa14.52□□□□□ -0.09
VRK3-217ENST00000599538 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.52□□□□□ -0.09
VRK3-217ENST00000599538 ZDHHC2Q9UIJ5 367 aa14.52□□□□□ -0.09
VRK3-217ENST00000599538 APOBEC2Q9Y235 224 aaKnown RBP14.52□□□□□ -0.09
VRK3-217ENST00000599538 A0A087X1B8 175 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 B2RBV5 119 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 H0Y626 953 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 CHUKO15111 745 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 CD3EAPO15446 510 aaKnown RBP14.51□□□□□ -0.09
VRK3-217ENST00000599538 HNRNPCL1O60812 293 aaKnown RBP14.51□□□□□ -0.09
VRK3-217ENST00000599538 RPP40O75818 363 aaKnown RBP14.51□□□□□ -0.09
VRK3-217ENST00000599538 FGF18O76093 207 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 MT-CO1P00395 513 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 JUNP05412 331 aaKnown RBP14.51□□□□□ -0.09
VRK3-217ENST00000599538 RAG1P15918 1043 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 GABRR2P28476 465 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 KCNC1P48547 511 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 TECRLQ5HYJ1 363 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 EPGNQ6UW88 154 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 TMC7Q7Z402 723 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 POU5F2Q8N7G0 328 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 MAB21L3Q8N8X9 362 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 RBM15BQ8NDT2 890 aaKnown RBP14.51□□□□□ -0.09
VRK3-217ENST00000599538 CDKN2AIPNLQ96HQ2 116 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 OR52B2Q96RD2 323 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 SIKE1Q9BRV8 207 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 TUBB6Q9BUF5 446 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 C11orf49Q9H6J7 331 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 WDR55Q9H6Y2 383 aaPredicted RBP14.51□□□□□ -0.09
VRK3-217ENST00000599538 PLK2Q9NYY3 685 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 CLEC4EQ9ULY5 219 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 GOLGA8QA0A0J9YX86 632 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 GOLGA8OA6NCC3 632 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 GOLGA8NF8WBI6 632 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 K7ERQ8 282 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 GFRA2O00451 464 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 ENTPD5O75356 428 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 WISP3O95389 354 aaPredicted RBP14.51□□□□□ -0.09
VRK3-217ENST00000599538 GLP2RO95838 553 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 OLFM2O95897 454 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 GJA8P48165 433 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 CDKN1CP49918 316 aaPredicted RBP14.51□□□□□ -0.09
VRK3-217ENST00000599538 ZNF140P52738 457 aaPredicted RBP14.51□□□□□ -0.09
VRK3-217ENST00000599538 PLK1P53350 603 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 TRAF2Q12933 501 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 GPR158Q5T848 1215 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 ARMC3Q5W041 872 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 Q6ZNB5 142 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 LCA5Q86VQ0 697 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 HERC6Q8IVU3 1022 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 PHTF2Q8N3S3 785 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 TEX9Q8N6V9 391 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 CCNYL1Q8N7R7 359 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 LPCAT1Q8NF37 534 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 OR4K2Q8NGD2 314 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 TTC8Q8TAM2 541 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 PDCD6IPQ8WUM4 868 aaKnown RBP14.51□□□□□ -0.09
VRK3-217ENST00000599538 UBXN10Q96LJ8 280 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 FEM1AQ9BSK4 669 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 ZBP1Q9H171 429 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 RETREG1Q9H6L5 497 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 CYP4F12Q9HCS2 524 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 NKX1-2Q9UD57 310 aaPredicted RBP14.51□□□□□ -0.09
VRK3-217ENST00000599538 MID2Q9UJV3 735 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 FCF1Q9Y324 198 aaKnown RBP14.51□□□□□ -0.09
VRK3-217ENST00000599538 OR51B4Q9Y5P0 310 aa14.51□□□□□ -0.09
VRK3-217ENST00000599538 RAI2Q9Y5P3 530 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms