RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 SMIM14Q96QK8 99 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 IL12RB2Q99665 862 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 ANP32EQ9BTT0 268 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 POLR1EQ9GZS1 481 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 RBM22Q9NW64 420 aaKnown RBP eCLIP11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 TOR4AQ9NXH8 423 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 B4GALT6Q9UBX8 382 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 AMACRQ9UHK6 382 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 PNMA8BQ9ULN7 279 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 PCDHB9Q9Y5E1 797 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 DMXL2Q8TDJ6 3036 aa11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 KMT2BQ9UMN6 2715 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-206ENST00000595523 A0A0U1RQS6 177 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 SPTY2D1-AS1A0A0U1RR47 76 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 NPIPB15A6NHN6 443 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 A8MX80 341 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 FPGTO14772 594 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 CST8O60676 142 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 MAGEC1O60732 1142 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 SDC3O75056 442 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 PGLSO95336 258 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 CPP00450 1065 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 MMP2P08253 660 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 ZFXP17010 805 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 LHCGRP22888 699 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 GRK6P43250 576 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 ARRB1P49407 418 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 PEX5P50542 639 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 POLR2LP62875 67 aaKnown RBP11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 SUZ12Q15022 739 aaKnown RBP11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 PRKD1Q15139 912 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 ZNF542PQ5EBM4 170 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 TFDP3Q5H9I0 405 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 KAZNQ674X7 775 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 NYAP1Q6ZVC0 841 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 KIAA1328Q86T90 577 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 PELI3Q8N2H9 469 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 OXR1Q8N573 874 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 EXD1Q8NHP7 514 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 FAM174AQ8TBP5 190 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 RHBDD1Q8TEB9 315 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 PDCD6IPQ8WUM4 868 aaKnown RBP11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 PIH1D2Q8WWB5 315 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 ALG3Q92685 438 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 ZNF830Q96NB3 372 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 MCCC1Q96RQ3 725 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 MAK16Q9BXY0 300 aaKnown RBP11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 CEP41Q9BYV8 373 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 UCKL1Q9NWZ5 548 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 KLF15Q9UIH9 416 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 PCDHA3Q9Y5H8 950 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 RAI2Q9Y5P3 530 aa11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 COL27A1Q8IZC6 1860 aaPredicted RBP11.04□□□□□ -0.64
SHKBP1-206ENST00000595523 MACROD2A1Z1Q3 448 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 CFAP69A5D8W1 941 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 YKT6O15498 198 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 RECQL5O94762 991 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 ZRANB2O95218 330 aaKnown RBP eCLIP11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 PRLP01236 227 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 JCHAINP01591 159 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 ALPIP09923 528 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 ATXN1LP0C7T5 689 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 ELFN1P0C7U0 828 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 GIMD1P0DJR0 217 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 TGM2P21980 687 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 CTNNA2P26232 953 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 RABIFP47224 123 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 ITKQ08881 620 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 AP1B1Q10567 949 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 EIF2B5Q13144 721 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 PDE1CQ14123 709 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 PDK1Q15118 436 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 CNGA3Q16281 694 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 PPP2R5EQ16537 467 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 ODF2Q5BJF6 829 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 ARMC12Q5T9G4 340 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 TSPAN33Q86UF1 283 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 SLCO6A1Q86UG4 719 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 NT5DC3Q86UY8 548 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 DCP2Q8IU60 420 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 RCOR2Q8IZ40 523 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 CBARPQ8N350 705 aaPredicted RBP11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 SLC25A45Q8N413 288 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 PLA2G15Q8NCC3 412 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 KIAA1524Q8TCG1 905 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 FUBP1Q96AE4 644 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 SCRN2Q96FV2 425 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 RBM41Q96IZ5 413 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 CALR3Q96L12 384 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 COQ10AQ96MF6 247 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 TDRD1Q9BXT4 1180 aaKnown RBP11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 PPIL1Q9Y3C6 166 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 TTLL3Q9Y4R7 772 aa11.03□□□□□ -0.64
SHKBP1-206ENST00000595523 A0A1W2PQ67 120 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 GOLGA8CPA6NN73 597 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 PPP1R12AO14974 1030 aaPredicted RBP11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 PIAS2O75928 621 aa11.02□□□□□ -0.65
SHKBP1-206ENST00000595523 DKK1O94907 266 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms