RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 PRPSAP2O60256 369 aa20.59■□□□□ 0.89
TRIM47-207ENST00000593089 RNF8O76064 485 aa20.59■□□□□ 0.89
TRIM47-207ENST00000593089 MIPP30301 263 aa20.59■□□□□ 0.89
TRIM47-207ENST00000593089 TYRO3Q06418 890 aa20.59■□□□□ 0.89
TRIM47-207ENST00000593089 BCL2L1Q07817 233 aa20.59■□□□□ 0.89
TRIM47-207ENST00000593089 AGERQ15109 404 aa20.59■□□□□ 0.89
TRIM47-207ENST00000593089 AFMIDQ63HM1 303 aa20.59■□□□□ 0.89
TRIM47-207ENST00000593089 KCTD16Q68DU8 428 aa20.59■□□□□ 0.89
TRIM47-207ENST00000593089 LVRNQ6Q4G3 990 aa20.59■□□□□ 0.89
TRIM47-207ENST00000593089 NPWQ8N729 165 aa20.59■□□□□ 0.89
TRIM47-207ENST00000593089 DPH1Q9BZG8 443 aa20.59■□□□□ 0.89
TRIM47-207ENST00000593089 HAUS4Q9H6D7 363 aa20.59■□□□□ 0.89
TRIM47-207ENST00000593089 RTN4Q9NQC3 1192 aaKnown RBP20.59■□□□□ 0.89
TRIM47-207ENST00000593089 CCDC187A0A096LP49 1063 aa20.58■□□□□ 0.89
TRIM47-207ENST00000593089 RECQL5O94762 991 aaPredicted RBP20.58■□□□□ 0.89
TRIM47-207ENST00000593089 TNFP01375 233 aa20.58■□□□□ 0.89
TRIM47-207ENST00000593089 IL10RBQ08334 325 aa20.58■□□□□ 0.89
TRIM47-207ENST00000593089 RALGDSQ12967 914 aa20.58■□□□□ 0.89
TRIM47-207ENST00000593089 PCSK4Q6UW60 755 aa20.58■□□□□ 0.89
TRIM47-207ENST00000593089 CYP4V2Q6ZWL3 525 aaPredicted RBP20.58■□□□□ 0.89
TRIM47-207ENST00000593089 ARL14Q8N4G2 192 aa20.58■□□□□ 0.89
TRIM47-207ENST00000593089 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.58■□□□□ 0.89
TRIM47-207ENST00000593089 CNOT8Q9UFF9 292 aaKnown RBP20.58■□□□□ 0.89
TRIM47-207ENST00000593089 A8MX80 341 aa20.57■□□□□ 0.88
TRIM47-207ENST00000593089 NTN3O00634 580 aaPredicted RBP20.57■□□□□ 0.88
TRIM47-207ENST00000593089 TNFSF15O95150 251 aa20.57■□□□□ 0.88
TRIM47-207ENST00000593089 FTLP02792 175 aaPredicted RBP20.57■□□□□ 0.88
TRIM47-207ENST00000593089 ELFN1P0C7U0 828 aa20.57■□□□□ 0.88
TRIM47-207ENST00000593089 SCNN1BP51168 640 aa20.57■□□□□ 0.88
TRIM47-207ENST00000593089 ANO6Q4KMQ2 910 aa20.57■□□□□ 0.88
TRIM47-207ENST00000593089 TAF1BQ53T94 588 aaPredicted RBP20.57■□□□□ 0.88
TRIM47-207ENST00000593089 LIPIQ6XZB0 460 aa20.57■□□□□ 0.88
TRIM47-207ENST00000593089 ZNF571Q7Z3V5 609 aaPredicted RBP20.57■□□□□ 0.88
TRIM47-207ENST00000593089 TP53INP2Q8IXH6 220 aa20.57■□□□□ 0.88
TRIM47-207ENST00000593089 SDR16C5Q8N3Y7 309 aa20.57■□□□□ 0.88
TRIM47-207ENST00000593089 OR1E3Q8WZA6 343 aa20.57■□□□□ 0.88
TRIM47-207ENST00000593089 FUBP1Q96AE4 644 aaKnown RBP20.57■□□□□ 0.88
TRIM47-207ENST00000593089 ZNF653Q96CK0 615 aa20.57■□□□□ 0.88
TRIM47-207ENST00000593089 ECHDC3Q96DC8 303 aa20.57■□□□□ 0.88
TRIM47-207ENST00000593089 GFM1Q96RP9 751 aaKnown RBP20.57■□□□□ 0.88
TRIM47-207ENST00000593089 NAT10Q9H0A0 1025 aaKnown RBP20.57■□□□□ 0.88
TRIM47-207ENST00000593089 EPB41L5Q9HCM4 733 aa20.57■□□□□ 0.88
TRIM47-207ENST00000593089 MRPL40Q9NQ50 206 aaKnown RBP20.57■□□□□ 0.88
TRIM47-207ENST00000593089 CWC15Q9P013 229 aaKnown RBP20.57■□□□□ 0.88
TRIM47-207ENST00000593089 TTC24A2A3L6 582 aaPredicted RBP20.56■□□□□ 0.88
TRIM47-207ENST00000593089 CFAP69A5D8W1 941 aa20.56■□□□□ 0.88
TRIM47-207ENST00000593089 TMEM202A6NGA9 273 aa20.56■□□□□ 0.88
TRIM47-207ENST00000593089 CDRT15L2A8MXV6 281 aa20.56■□□□□ 0.88
TRIM47-207ENST00000593089 ERVH48-1M5A8F1 160 aa20.56■□□□□ 0.88
TRIM47-207ENST00000593089 CACNB4O00305 520 aaPredicted RBP20.56■□□□□ 0.88
TRIM47-207ENST00000593089 LRCH4O75427 683 aa20.56■□□□□ 0.88
TRIM47-207ENST00000593089 RPLP0P05388 317 aaKnown RBP20.56■□□□□ 0.88
TRIM47-207ENST00000593089 KIAA1024LP59773 190 aa20.56■□□□□ 0.88
TRIM47-207ENST00000593089 POLR2LP62875 67 aaKnown RBP20.56■□□□□ 0.88
TRIM47-207ENST00000593089 CCL7P80098 99 aa20.56■□□□□ 0.88
TRIM47-207ENST00000593089 NSUN2Q08J23 767 aaKnown RBP eCLIP20.56■□□□□ 0.88
TRIM47-207ENST00000593089 RFTN1Q14699 578 aaPredicted RBP20.56■□□□□ 0.88
TRIM47-207ENST00000593089 E4F1Q66K89 784 aaPredicted RBP20.56■□□□□ 0.88
TRIM47-207ENST00000593089 DPPA4Q7L190 304 aa20.56■□□□□ 0.88
TRIM47-207ENST00000593089 B3GNT8Q7Z7M8 397 aa20.56■□□□□ 0.88
TRIM47-207ENST00000593089 OR56A4Q8NGH8 313 aa20.56■□□□□ 0.88
TRIM47-207ENST00000593089 NSMCE3Q96MG7 304 aa20.56■□□□□ 0.88
TRIM47-207ENST00000593089 RBM15Q96T37 977 aaKnown RBP eCLIP20.56■□□□□ 0.88
TRIM47-207ENST00000593089 FGF22Q9HCT0 170 aa20.56■□□□□ 0.88
TRIM47-207ENST00000593089 MYO1AQ9UBC5 1043 aa20.56■□□□□ 0.88
TRIM47-207ENST00000593089 DGKBQ9Y6T7 804 aa20.56■□□□□ 0.88
TRIM47-207ENST00000593089 GCN1Q92616 2671 aaKnown RBP20.56■□□□□ 0.88
TRIM47-207ENST00000593089 TRAFD1O14545 582 aaPredicted RBP20.55■□□□□ 0.88
TRIM47-207ENST00000593089 MBD3O95983 291 aa20.55■□□□□ 0.88
TRIM47-207ENST00000593089 SKOR1P84550 965 aa20.55■□□□□ 0.88
TRIM47-207ENST00000593089 RHDQ02161 417 aa20.55■□□□□ 0.88
TRIM47-207ENST00000593089 VAC14Q08AM6 782 aa20.55■□□□□ 0.88
TRIM47-207ENST00000593089 SLC10A7Q0GE19 358 aa20.55■□□□□ 0.88
TRIM47-207ENST00000593089 DPYSQ14117 519 aa20.55■□□□□ 0.88
TRIM47-207ENST00000593089 LBRQ14739 615 aaKnown RBP20.55■□□□□ 0.88
TRIM47-207ENST00000593089 ACOX1Q15067 660 aa20.55■□□□□ 0.88
TRIM47-207ENST00000593089 FILIP1LQ4L180 1135 aa20.55■□□□□ 0.88
TRIM47-207ENST00000593089 TAF8Q7Z7C8 310 aa20.55■□□□□ 0.88
TRIM47-207ENST00000593089 ZNF843Q8N446 348 aa20.55■□□□□ 0.88
TRIM47-207ENST00000593089 FNIP1Q8TF40 1166 aa20.55■□□□□ 0.88
TRIM47-207ENST00000593089 CCDC97Q96F63 343 aaPredicted RBP20.55■□□□□ 0.88
TRIM47-207ENST00000593089 LIN37Q96GY3 246 aaPredicted RBP20.55■□□□□ 0.88
TRIM47-207ENST00000593089 PSKH2Q96QS6 385 aa20.55■□□□□ 0.88
TRIM47-207ENST00000593089 FOXP3Q9BZS1 431 aa20.55■□□□□ 0.88
TRIM47-207ENST00000593089 ZWILCHQ9H900 591 aa20.55■□□□□ 0.88
TRIM47-207ENST00000593089 SEPT3Q9UH03 358 aa20.55■□□□□ 0.88
TRIM47-207ENST00000593089 MOSPD1Q9UJG1 213 aa20.55■□□□□ 0.88
TRIM47-207ENST00000593089 SCINQ9Y6U3 715 aa20.55■□□□□ 0.88
TRIM47-207ENST00000593089 A0A1W2PQM1 296 aa20.54■□□□□ 0.88
TRIM47-207ENST00000593089 D6RAR5 112 aa20.54■□□□□ 0.88
TRIM47-207ENST00000593089 DDX3XO00571 662 aaKnown RBP eCLIP20.54■□□□□ 0.88
TRIM47-207ENST00000593089 GZMAP12544 262 aa20.54■□□□□ 0.88
TRIM47-207ENST00000593089 GM2AP17900 193 aa20.54■□□□□ 0.88
TRIM47-207ENST00000593089 HCAR3P49019 387 aa20.54■□□□□ 0.88
TRIM47-207ENST00000593089 RENBPP51606 427 aa20.54■□□□□ 0.88
TRIM47-207ENST00000593089 AP1S1P61966 158 aa20.54■□□□□ 0.88
TRIM47-207ENST00000593089 CFHR1Q03591 330 aa20.54■□□□□ 0.88
TRIM47-207ENST00000593089 KLHL30Q0D2K2 578 aa20.54■□□□□ 0.88
TRIM47-207ENST00000593089 TMCO4Q5TGY1 634 aa20.54■□□□□ 0.88
TRIM47-207ENST00000593089 CLEC14AQ86T13 490 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms