RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 A0A1W2PQJ5 194 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 TRAFD1O14545 582 aaPredicted RBP13.35□□□□□ -0.27
APOC1-209ENST00000592885 MUSKO15146 869 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 SOCS5O75159 536 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 HOXC4P09017 264 aaPredicted RBP13.35□□□□□ -0.27
APOC1-209ENST00000592885 ELFN1P0C7U0 828 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 CTSEP14091 401 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 SRP54P61011 504 aaKnown RBP13.35□□□□□ -0.27
APOC1-209ENST00000592885 TPM4P67936 248 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 TLE3Q04726 772 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 RALGDSQ12967 914 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 C1orf61Q13536 156 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 ZNF235Q14590 738 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 INPP5AQ14642 412 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 LBRQ14739 615 aaKnown RBP13.35□□□□□ -0.27
APOC1-209ENST00000592885 BOLA3Q53S33 107 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 RALGPS1Q5JS13 557 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 BROXQ5VW32 411 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 ENPP7Q6UWV6 458 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 ZSWIM9Q86XI8 627 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 HID1Q8IV36 788 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 SPACA3Q8IXA5 215 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 BBS5Q8N3I7 341 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 NIPA2Q8N8Q9 360 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 TEKT4Q8WW24 435 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 SYN2Q92777 582 aaPredicted RBP13.35□□□□□ -0.27
APOC1-209ENST00000592885 CRELD1Q96HD1 420 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 TRIM7Q9C029 511 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 ASCL3Q9NQ33 180 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 CWC15Q9P013 229 aaKnown RBP13.35□□□□□ -0.27
APOC1-209ENST00000592885 PADI4Q9UM07 663 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 ENTPD2Q9Y5L3 495 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 BAHCC1Q9P281 2608 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 ASXL3Q9C0F0 2248 aa13.35□□□□□ -0.27
APOC1-209ENST00000592885 CACNB4O00305 520 aaPredicted RBP13.34□□□□□ -0.27
APOC1-209ENST00000592885 TNFRSF10CO14798 259 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 ATXN7O15265 892 aaPredicted RBP13.34□□□□□ -0.27
APOC1-209ENST00000592885 SERPINC1P01008 464 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 PCCBP05166 539 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 SERPINB6P35237 376 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 CCDC173Q0VFZ6 552 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 SPIDRQ14159 915 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 PIGHQ14442 188 aaPredicted RBP13.34□□□□□ -0.27
APOC1-209ENST00000592885 NR1I3Q14994 352 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 IQCB1Q15051 598 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 TDRD12Q587J7 1177 aaKnown RBP13.34□□□□□ -0.27
APOC1-209ENST00000592885 PERM1Q5SV97 790 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 TMCO3Q6UWJ1 677 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 LIPIQ6XZB0 460 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 GPR155Q7Z3F1 870 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 PAF1Q8N7H5 531 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 OR56A4Q8NGH8 313 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 PCDH19Q8TAB3 1148 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 CCDC97Q96F63 343 aaPredicted RBP13.34□□□□□ -0.27
APOC1-209ENST00000592885 BBC3Q96PG8 261 aaPredicted RBP13.34□□□□□ -0.27
APOC1-209ENST00000592885 RBM15Q96T37 977 aaKnown RBP eCLIP13.34□□□□□ -0.27
APOC1-209ENST00000592885 CCDC3Q9BQI4 270 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 FUCA2Q9BTY2 467 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 DPH1Q9BZG8 443 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 RCOR3Q9P2K3 495 aaPredicted RBP13.34□□□□□ -0.27
APOC1-209ENST00000592885 SATB2Q9UPW6 733 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 OR1A2Q9Y585 309 aa13.34□□□□□ -0.27
APOC1-209ENST00000592885 RP1P56715 2156 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 CCDC187A0A096LP49 1063 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 TMX2-CTNND1H3BSU7 103 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 PDE2AO00408 941 aaPredicted RBP13.33□□□□□ -0.28
APOC1-209ENST00000592885 NTN3O00634 580 aaPredicted RBP13.33□□□□□ -0.28
APOC1-209ENST00000592885 HTRA2O43464 458 aaPredicted RBP13.33□□□□□ -0.28
APOC1-209ENST00000592885 RECQL5O94762 991 aaPredicted RBP13.33□□□□□ -0.28
APOC1-209ENST00000592885 TNFP01375 233 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 CR2P20023 1033 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 RBMS1P29558 406 aaKnown RBP13.33□□□□□ -0.28
APOC1-209ENST00000592885 TRIM23P36406 574 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 SCNN1BP51168 640 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 CDH6P55285 790 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 TMPRSS3P57727 454 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 EIF3IQ13347 325 aaKnown RBP13.33□□□□□ -0.28
APOC1-209ENST00000592885 TSR1Q2NL82 804 aaKnown RBP13.33□□□□□ -0.28
APOC1-209ENST00000592885 C3orf38Q5JPI3 329 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 CAVIN1Q6NZI2 390 aaKnown RBP13.33□□□□□ -0.28
APOC1-209ENST00000592885 ARHGAP36Q6ZRI8 547 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 POLNQ7Z5Q5 900 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 KYQ8NBH2 561 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 WDR36Q8NI36 951 aaKnown RBP13.33□□□□□ -0.28
APOC1-209ENST00000592885 NSMCE1Q8WV22 266 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 KCNE4Q8WWG9 221 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 TSACCQ96A04 125 aaPredicted RBP13.33□□□□□ -0.28
APOC1-209ENST00000592885 PDXPQ96GD0 296 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 ATXN7L3BQ96GX2 97 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 LIN37Q96GY3 246 aaPredicted RBP13.33□□□□□ -0.28
APOC1-209ENST00000592885 NAP1L5Q96NT1 182 aaPredicted RBP13.33□□□□□ -0.28
APOC1-209ENST00000592885 CSPG4P5Q96PW8 444 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 NUDCD1Q96RS6 583 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 MGME1Q9BQP7 344 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 WDR26Q9H7D7 661 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.33□□□□□ -0.28
APOC1-209ENST00000592885 MYO1AQ9UBC5 1043 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 IP6K2Q9UHH9 426 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 GPR34Q9UPC5 381 aa13.33□□□□□ -0.28
APOC1-209ENST00000592885 PSMD11O00231 422 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms