RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 COL9A2Q14055 689 aaPredicted RBP14.95□□□□□ -0.02
SF3A2-207ENST00000592839 LRRC38Q5VT99 294 aa14.95□□□□□ -0.02
SF3A2-207ENST00000592839 ESRP1Q6NXG1 681 aaKnown RBP14.95□□□□□ -0.02
SF3A2-207ENST00000592839 LVRNQ6Q4G3 990 aa14.95□□□□□ -0.02
SF3A2-207ENST00000592839 LIPIQ6XZB0 460 aa14.95□□□□□ -0.02
SF3A2-207ENST00000592839 BBS5Q8N3I7 341 aa14.95□□□□□ -0.02
SF3A2-207ENST00000592839 ATPAF2Q8N5M1 289 aa14.95□□□□□ -0.02
SF3A2-207ENST00000592839 NETO2Q8NC67 525 aa14.95□□□□□ -0.02
SF3A2-207ENST00000592839 PCDH19Q8TAB3 1148 aa14.95□□□□□ -0.02
SF3A2-207ENST00000592839 HSPH1Q92598 858 aa14.95□□□□□ -0.02
SF3A2-207ENST00000592839 APOLD1Q96LR9 279 aa14.95□□□□□ -0.02
SF3A2-207ENST00000592839 SCUBE2Q9NQ36 999 aa14.95□□□□□ -0.02
SF3A2-207ENST00000592839 EVA1BQ9NVM1 165 aa14.95□□□□□ -0.02
SF3A2-207ENST00000592839 DNAJC28Q9NX36 388 aa14.95□□□□□ -0.02
SF3A2-207ENST00000592839 RP1P56715 2156 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 EME2A4GXA9 379 aaPredicted RBP14.94□□□□□ -0.02
SF3A2-207ENST00000592839 CD48P09326 243 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 JUNDP17535 347 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 XPAP23025 273 aaPredicted RBP14.94□□□□□ -0.02
SF3A2-207ENST00000592839 CES1P23141 567 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 DUSP3P51452 185 aaPredicted RBP14.94□□□□□ -0.02
SF3A2-207ENST00000592839 THOP1P52888 689 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 ZNF235Q14590 738 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 NFATC4Q14934 902 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 HS1BP3Q53T59 392 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 LRRC73Q5JTD7 316 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 HES3Q5TGS1 186 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 TIGD7Q6NT04 549 aaPredicted RBP14.94□□□□□ -0.02
SF3A2-207ENST00000592839 IGF2-ASQ6U949 168 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 NLRP8Q86W28 1048 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 CNGA4Q8IV77 575 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 RHOT2Q8IXI1 618 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 PHACTR4Q8IZ21 702 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 FSTL5Q8N475 847 aaPredicted RBP14.94□□□□□ -0.02
SF3A2-207ENST00000592839 HDAC11Q96DB2 347 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 COQ10AQ96MF6 247 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 WRAP53Q9BUR4 548 aaKnown RBP14.94□□□□□ -0.02
SF3A2-207ENST00000592839 LRRC61Q9BV99 259 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 PACSIN1Q9BY11 444 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 SPASTQ9UBP0 616 aa14.94□□□□□ -0.02
SF3A2-207ENST00000592839 A0A087WV48 116 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 TRABD2BA6NFA1 517 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 TNFRSF10CO14798 259 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 MFSD11O43934 449 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 LCA5LO95447 670 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 CCNCP24863 283 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 NFKBIAP25963 317 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 MMP13P45452 471 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 SCNN1BP51168 640 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 HK3P52790 923 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 TAS2R40P59535 323 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 NFKBIBQ15653 356 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 ANKRD20A8PQ5CZ79 823 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 C6orf132Q5T0Z8 1188 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 CFAP58Q5T655 872 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 MARC1Q5VT66 337 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 MAP7D3Q8IWC1 876 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 PQLC3Q8N755 202 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 ATL2Q8NHH9 583 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 GRAMD1AQ96CP6 724 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 NXPE2Q96DL1 559 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 SCRN2Q96FV2 425 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 LYSMD1Q96S90 227 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 ZNHIT6Q9NWK9 470 aaKnown RBP14.93□□□□□ -0.02
SF3A2-207ENST00000592839 CTTNBP2NLQ9P2B4 639 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 APOBEC3BQ9UH17 382 aaKnown RBP14.93□□□□□ -0.02
SF3A2-207ENST00000592839 PHTF1Q9UMS5 762 aa14.93□□□□□ -0.02
SF3A2-207ENST00000592839 MATN3O15232 486 aa14.92□□□□□ -0.02
SF3A2-207ENST00000592839 DXOO77932 396 aaKnown RBP14.92□□□□□ -0.02
SF3A2-207ENST00000592839 RECQL5O94762 991 aaPredicted RBP14.92□□□□□ -0.02
SF3A2-207ENST00000592839 PGLSO95336 258 aa14.92□□□□□ -0.02
SF3A2-207ENST00000592839 HOXB3P14651 431 aaPredicted RBP14.92□□□□□ -0.02
SF3A2-207ENST00000592839 MX2P20592 715 aa14.92□□□□□ -0.02
SF3A2-207ENST00000592839 HTR1BP28222 390 aa14.92□□□□□ -0.02
SF3A2-207ENST00000592839 PPARDQ03181 441 aa14.92□□□□□ -0.02
SF3A2-207ENST00000592839 TRAF2Q12933 501 aa14.92□□□□□ -0.02
SF3A2-207ENST00000592839 MMRN1Q13201 1228 aa14.92□□□□□ -0.02
SF3A2-207ENST00000592839 KRT81Q14533 505 aa14.92□□□□□ -0.02
SF3A2-207ENST00000592839 IFI16Q16666 785 aaKnown RBP14.92□□□□□ -0.02
SF3A2-207ENST00000592839 SLC9A4Q6AI14 798 aa14.92□□□□□ -0.02
SF3A2-207ENST00000592839 WDR48Q8TAF3 677 aa14.92□□□□□ -0.02
SF3A2-207ENST00000592839 RBM15Q96T37 977 aaKnown RBP eCLIP14.92□□□□□ -0.02
SF3A2-207ENST00000592839 CHP1Q99653 195 aa14.92□□□□□ -0.02
SF3A2-207ENST00000592839 APOOQ9BUR5 198 aa14.92□□□□□ -0.02
SF3A2-207ENST00000592839 POLR1EQ9GZS1 481 aaKnown RBP14.92□□□□□ -0.02
SF3A2-207ENST00000592839 NHEJ1Q9H9Q4 299 aaPredicted RBP14.92□□□□□ -0.02
SF3A2-207ENST00000592839 NOD2Q9HC29 1040 aa14.92□□□□□ -0.02
SF3A2-207ENST00000592839 B4GALT6Q9UBX8 382 aa14.92□□□□□ -0.02
SF3A2-207ENST00000592839 CLCA2Q9UQC9 943 aa14.92□□□□□ -0.02
SF3A2-207ENST00000592839 GPSM3Q9Y4H4 160 aa14.92□□□□□ -0.02
SF3A2-207ENST00000592839 C3orf70A6NLC5 250 aaPredicted RBP14.91□□□□□ -0.02
SF3A2-207ENST00000592839 GCATO75600 419 aa14.91□□□□□ -0.02
SF3A2-207ENST00000592839 HEXIM1O94992 359 aaKnown RBP14.91□□□□□ -0.02
SF3A2-207ENST00000592839 TPM1P09493 284 aa14.91□□□□□ -0.02
SF3A2-207ENST00000592839 ELFN1P0C7U0 828 aa14.91□□□□□ -0.02
SF3A2-207ENST00000592839 FECHP22830 423 aa14.91□□□□□ -0.02
SF3A2-207ENST00000592839 SLC1A1P43005 524 aa14.91□□□□□ -0.02
SF3A2-207ENST00000592839 RPL26P61254 145 aaKnown RBP14.91□□□□□ -0.02
SF3A2-207ENST00000592839 DPTQ07507 201 aa14.91□□□□□ -0.02
SF3A2-207ENST00000592839 INPP5AQ14642 412 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms