RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 CSO75390 466 aaKnown RBP16.92■□□□□ 0.3
CROCCP3-203ENST00000589964 FUCA1P04066 466 aa16.92■□□□□ 0.3
CROCCP3-203ENST00000589964 EIF2S3P41091 472 aaKnown RBP16.92■□□□□ 0.3
CROCCP3-203ENST00000589964 CDH6P55285 790 aa16.92■□□□□ 0.3
CROCCP3-203ENST00000589964 BCL2L1Q07817 233 aa16.92■□□□□ 0.3
CROCCP3-203ENST00000589964 ELP6Q0PNE2 266 aa16.92■□□□□ 0.3
CROCCP3-203ENST00000589964 DPYSL3Q14195 570 aa16.92■□□□□ 0.3
CROCCP3-203ENST00000589964 NFATC4Q14934 902 aa16.92■□□□□ 0.3
CROCCP3-203ENST00000589964 CNGA3Q16281 694 aa16.92■□□□□ 0.3
CROCCP3-203ENST00000589964 NCBP2-AS2Q69YL0 99 aa16.92■□□□□ 0.3
CROCCP3-203ENST00000589964 ZCCHC8Q6NZY4 707 aaKnown RBP16.92■□□□□ 0.3
CROCCP3-203ENST00000589964 TMCO3Q6UWJ1 677 aa16.92■□□□□ 0.3
CROCCP3-203ENST00000589964 DPPA4Q7L190 304 aa16.92■□□□□ 0.3
CROCCP3-203ENST00000589964 MGME1Q9BQP7 344 aa16.92■□□□□ 0.3
CROCCP3-203ENST00000589964 MRPL47Q9HD33 250 aaKnown RBP16.92■□□□□ 0.3
CROCCP3-203ENST00000589964 SEPT3Q9UH03 358 aa16.92■□□□□ 0.3
CROCCP3-203ENST00000589964 LUC7L2Q9Y383 392 aaKnown RBP16.92■□□□□ 0.3
CROCCP3-203ENST00000589964 CSNK1G3Q9Y6M4 447 aa16.92■□□□□ 0.3
CROCCP3-203ENST00000589964 A0A087WV48 116 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 NPIPB15A6NHN6 443 aaPredicted RBP16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 TMEM110-MUSTN1A8MSY1 372 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 LMO7DNF2Z398 122 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 H3BM21 787 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 HTRA2O43464 458 aaPredicted RBP16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 LZTS3O60299 673 aaPredicted RBP16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 PDHA1P08559 390 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 CTPS1P17812 591 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 SERPINA4P29622 427 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 SSR1P43307 286 aaKnown RBP16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 PPARDQ03181 441 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 SLC10A2Q12908 348 aaPredicted RBP16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 PIGHQ14442 188 aaPredicted RBP16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 BOLA3Q53S33 107 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 ENPP7Q6UWV6 458 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 HSD11B1LQ7Z5J1 315 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 ZSCAN30Q86W11 494 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 PQLC3Q8N755 202 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 FAM174AQ8TBP5 190 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 ZNF564Q8TBZ8 553 aaPredicted RBP16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 FAM71BQ8TC56 605 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 MAPK15Q8TD08 544 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 HCAR2Q8TDS4 363 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 TEKT4Q8WW24 435 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 COQ10AQ96MF6 247 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 CHP1Q99653 195 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 SPASTQ9UBP0 616 aa16.91■□□□□ 0.3
CROCCP3-203ENST00000589964 GOLGA6L19H0YKK7 550 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 ALPIP09923 528 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 ALPPL2P10696 532 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 DESP17661 470 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 HNRNPH3P31942 346 aaKnown RBP16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 ARL4AP40617 200 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 HK3P52790 923 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 SRP54P61011 504 aaKnown RBP16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 AP1S1P61966 158 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 YPEL5P62699 121 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 DSC2Q02487 901 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 GBE1Q04446 702 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 ZNF235Q14590 738 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 AGERQ15109 404 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 SOWAHCQ53LP3 525 aaPredicted RBP16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 C6orf132Q5T0Z8 1188 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 CFAP58Q5T655 872 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 DENND2CQ68D51 928 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 ERAP2Q6P179 960 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 B4GALNT4Q76KP1 1039 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 B3GNT8Q7Z7M8 397 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 ATPAF2Q8N5M1 289 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 RNF214Q8ND24 703 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 PDCD6IPQ8WUM4 868 aaKnown RBP16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 ATXN7L3BQ96GX2 97 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 NUDCD1Q96RS6 583 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 SLC13A1Q9BZW2 595 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 NRSN2Q9GZP1 204 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 SUDS3Q9H7L9 328 aaPredicted RBP16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 NT5MQ9NPB1 228 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 SPTLC3Q9NUV7 552 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 IP6K2Q9UHH9 426 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 ST14Q9Y5Y6 855 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 MGAQ8IWI9 3026 aa16.9■□□□□ 0.3
CROCCP3-203ENST00000589964 EME2A4GXA9 379 aaPredicted RBP16.89■□□□□ 0.29
CROCCP3-203ENST00000589964 NEMP2A6NFY4 417 aa16.89■□□□□ 0.29
CROCCP3-203ENST00000589964 USP12O75317 370 aa16.89■□□□□ 0.29
CROCCP3-203ENST00000589964 ELFN1P0C7U0 828 aa16.89■□□□□ 0.29
CROCCP3-203ENST00000589964 SUOXP51687 545 aa16.89■□□□□ 0.29
CROCCP3-203ENST00000589964 NSUN2Q08J23 767 aaKnown RBP eCLIP16.89■□□□□ 0.29
CROCCP3-203ENST00000589964 NIPAL4Q0D2K0 466 aa16.89■□□□□ 0.29
CROCCP3-203ENST00000589964 KRT81Q14533 505 aa16.89■□□□□ 0.29
CROCCP3-203ENST00000589964 RFTN1Q14699 578 aaPredicted RBP16.89■□□□□ 0.29
CROCCP3-203ENST00000589964 ACAP1Q15027 740 aa16.89■□□□□ 0.29
CROCCP3-203ENST00000589964 NR0B2Q15466 257 aa16.89■□□□□ 0.29
CROCCP3-203ENST00000589964 RAPGEF5Q92565 580 aa16.89■□□□□ 0.29
CROCCP3-203ENST00000589964 NAF1Q96HR8 494 aaKnown RBP16.89■□□□□ 0.29
CROCCP3-203ENST00000589964 ZNF599Q96NL3 588 aa16.89■□□□□ 0.29
CROCCP3-203ENST00000589964 IL12RB2Q99665 862 aa16.89■□□□□ 0.29
CROCCP3-203ENST00000589964 C1QTNF7Q9BXJ2 289 aa16.89■□□□□ 0.29
CROCCP3-203ENST00000589964 BRD8Q9H0E9 1235 aa16.89■□□□□ 0.29
CROCCP3-203ENST00000589964 SCUBE2Q9NQ36 999 aa16.89■□□□□ 0.29
CROCCP3-203ENST00000589964 GULP1Q9UBP9 304 aa16.89■□□□□ 0.29
CROCCP3-203ENST00000589964 SALL4Q9UJQ4 1053 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms