RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 COMMD10Q9Y6G5 202 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.43□□□□□ -0.74
VPS25-203ENST00000589520 E2F8A0AVK6 867 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 GOLGA8CPA6NN73 597 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 ANKRD66B4E2M5 251 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 CD3EAPO15446 510 aaKnown RBP10.43□□□□□ -0.74
VPS25-203ENST00000589520 TSPAN3O60637 253 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 ZMPSTE24O75844 475 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 HSPA4LO95757 839 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 RB1P06400 928 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 PTPN2P17706 415 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 LPOP22079 712 aaPredicted RBP10.43□□□□□ -0.74
VPS25-203ENST00000589520 ATP5F1P24539 256 aaPredicted RBP10.43□□□□□ -0.74
VPS25-203ENST00000589520 SERPINB3P29508 390 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 PMLP29590 882 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 HOXA9P31269 272 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 EPHA5P54756 1037 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 AQP5P55064 265 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 ARF5P84085 180 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 GALNT1Q10472 559 aaPredicted RBP10.43□□□□□ -0.74
VPS25-203ENST00000589520 PRKAA1Q13131 559 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 SPRED3Q2MJR0 410 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 ARHGAP15Q53QZ3 475 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 AARS2Q5JTZ9 985 aaKnown RBP10.43□□□□□ -0.74
VPS25-203ENST00000589520 PPM1LQ5SGD2 360 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 HECTD2Q5U5R9 776 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 TXNDC8Q6A555 127 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 PDE12Q6L8Q7 609 aaKnown RBP10.43□□□□□ -0.74
VPS25-203ENST00000589520 CYB5D1Q6P9G0 228 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 AFTPHQ6ULP2 937 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 C16orf59Q7L2K0 433 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 OTOP2Q7RTS6 562 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 PTAR1Q7Z6K3 402 aaPredicted RBP10.43□□□□□ -0.74
VPS25-203ENST00000589520 TMC8Q8IU68 726 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 SLC41A1Q8IVJ1 513 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 MFN1Q8IWA4 741 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 ARHGAP24Q8N264 748 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 FSTL5Q8N475 847 aaPredicted RBP10.43□□□□□ -0.74
VPS25-203ENST00000589520 AFAP1L2Q8N4X5 818 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 MRPL43Q8N983 215 aaKnown RBP10.43□□□□□ -0.74
VPS25-203ENST00000589520 TDRD5Q8NAT2 981 aaKnown RBP10.43□□□□□ -0.74
VPS25-203ENST00000589520 FIBINQ8TAL6 211 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 BLOC1S5Q8TDH9 187 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 DDI1Q8WTU0 396 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 HERVK_113Q902F9 699 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 THOC1Q96FV9 657 aaKnown RBP10.43□□□□□ -0.74
VPS25-203ENST00000589520 CDKN2AIPNLQ96HQ2 116 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 FAR2Q96K12 515 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 CNDP1Q96KN2 507 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 MMADHCQ9H3L0 296 aaPredicted RBP10.43□□□□□ -0.74
VPS25-203ENST00000589520 CATSPERZQ9NTU4 200 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 GGT7Q9UJ14 662 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 HAO1Q9UJM8 370 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 VPS28Q9UK41 221 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 RAP2CQ9Y3L5 183 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 OR51B4Q9Y5P0 310 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 RAI2Q9Y5P3 530 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 SHROOM3Q8TF72 1996 aa10.43□□□□□ -0.74
VPS25-203ENST00000589520 NYNRINQ9P2P1 1898 aaKnown RBP10.42□□□□□ -0.74
VPS25-203ENST00000589520 LAMA3Q16787 3333 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 GOLGA8QA0A0J9YX86 632 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 CCDC195A0A1B0GUA6 201 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 A0A1W2PQ67 120 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 GOLGA8OA6NCC3 632 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 TARM1B6A8C7 271 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 GOLGA8NF8WBI6 632 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 H7C0S8 307 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 FCHO1O14526 889 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 PHGDHO43175 533 aaKnown RBP10.42□□□□□ -0.74
VPS25-203ENST00000589520 TMCC1O94876 653 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 GOT2P00505 430 aaKnown RBP10.42□□□□□ -0.74
VPS25-203ENST00000589520 CKMP06732 381 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 HNRNPA1P09651 372 aaKnown RBP eCLIP10.42□□□□□ -0.74
VPS25-203ENST00000589520 LINC00271P0C7V0 271 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 T-ENOLP0DO92 83 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 ESRRAP11474 423 aaPredicted RBP10.42□□□□□ -0.74
VPS25-203ENST00000589520 TCF3P15923 654 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 SAT1P21673 171 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 ADSLP30566 484 aaPredicted RBP10.42□□□□□ -0.74
VPS25-203ENST00000589520 CA8P35219 290 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 GRIA4P48058 902 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 SUOXP51687 545 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 PTPN5P54829 565 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 TAS2R39P59534 338 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 RHOAP61586 193 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 ELF3P78545 371 aaPredicted RBP10.42□□□□□ -0.74
VPS25-203ENST00000589520 SULT2A1Q06520 285 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 IHHQ14623 411 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 DLG2Q15700 870 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 CTC1Q2NKJ3 1217 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 TYSND1Q2T9J0 566 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 FSCBQ5H9T9 825 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 CFAP157Q5JU67 520 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 CNSTQ6PJW8 725 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 GAREM2Q75VX8 874 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 PIWIL4Q7Z3Z4 852 aaKnown RBP10.42□□□□□ -0.74
VPS25-203ENST00000589520 GLT6D1Q7Z4J2 308 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 HOMEZQ8IX15 550 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 PARP9Q8IXQ6 854 aa10.42□□□□□ -0.74
VPS25-203ENST00000589520 STK40Q8N2I9 435 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms