RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 DBN1Q16643 649 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 CCDC153Q494R4 210 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 C6orf132Q5T0Z8 1188 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 ATXN7L2Q5T6C5 722 aaPredicted RBP8.81□□□□□ -1
SMAD4-206ENST00000588860 RNF43Q68DV7 783 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 TPGS1Q6ZTW0 290 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 KIAA0408Q6ZU52 694 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 CCDC91Q7Z6B0 441 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 APCDD1Q8J025 514 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 PLD6Q8N2A8 252 aaKnown RBP8.81□□□□□ -1
SMAD4-206ENST00000588860 GPATCH11Q8N954 259 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 DCAF4L2Q8NA75 395 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 LPCAT1Q8NF37 534 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 OR13J1Q8NGT2 312 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 RAB3IL1Q8TBN0 382 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 SH3RF2Q8TEC5 729 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 C10orf82Q8WW14 230 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 CCT6BQ92526 530 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 HDAC10Q969S8 669 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 RMDN1Q96DB5 314 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 DNAJC1Q96KC8 554 aaKnown RBP8.81□□□□□ -1
SMAD4-206ENST00000588860 RMDN2Q96LZ7 410 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 NSMCE3Q96MG7 304 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 TRIB3Q96RU7 358 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 TDRD1Q9BXT4 1180 aaKnown RBP8.81□□□□□ -1
SMAD4-206ENST00000588860 MFSD1Q9H3U5 465 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 TASP1Q9H6P5 420 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 FBXO6Q9NRD1 293 aaPredicted RBP8.81□□□□□ -1
SMAD4-206ENST00000588860 PLK2Q9NYY3 685 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 TMEM216Q9P0N5 145 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 SIRPGQ9P1W8 387 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 TLK1Q9UKI8 766 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 ARHGAP26Q9UNA1 814 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 FCF1Q9Y324 198 aaKnown RBP8.81□□□□□ -1
SMAD4-206ENST00000588860 SPO11Q9Y5K1 396 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 RAI2Q9Y5P3 530 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 ARL5AQ9Y689 179 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 USH1CQ9Y6N9 552 aa8.81□□□□□ -1
SMAD4-206ENST00000588860 CCDC162PA2VCL2 907 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 OR51F1A6NGY5 319 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 C5orf67F2Z3F1 127 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 HGSO14964 777 aaPredicted RBP8.8□□□□□ -1
SMAD4-206ENST00000588860 PHGDHO43175 533 aaKnown RBP8.8□□□□□ -1
SMAD4-206ENST00000588860 SLC7A4O43246 635 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 BUD23O43709 281 aaKnown RBP8.8□□□□□ -1
SMAD4-206ENST00000588860 XYLBO75191 536 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 MOSPD3O75425 235 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 RPP40O75818 363 aaKnown RBP8.8□□□□□ -1
SMAD4-206ENST00000588860 CRTAMO95727 393 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 CD160O95971 181 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 IL1BP01584 269 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 SLC4A1P02730 911 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 CYBBP04839 570 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 RB1P06400 928 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 CRABP2P29373 138 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 LIG3P49916 1009 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 ARSDP51689 593 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 CLCN5P51795 746 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 EPHA5P54756 1037 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 SLC12A2P55011 1212 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 NTHL1P78549 312 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 NSUN2Q08J23 767 aaKnown RBP eCLIP8.8□□□□□ -1
SMAD4-206ENST00000588860 BST1Q10588 318 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 LMAN2Q12907 356 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 TRAF2Q12933 501 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 STX3Q13277 289 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 SLC12A1Q13621 1099 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 PTPRCAPQ14761 206 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 PCLAFQ15004 111 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 PROX2Q3B8N5 592 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 LACTB2Q53H82 288 aaPredicted RBP8.8□□□□□ -1
SMAD4-206ENST00000588860 CES4AQ5XG92 561 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 MBLAC2Q68D91 279 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 NCEH1Q6PIU2 408 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 ZCCHC23Q6ZST2 131 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 RTL10Q7L3V2 364 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 GLT6D1Q7Z4J2 308 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 PTAR1Q7Z6K3 402 aaPredicted RBP8.8□□□□□ -1
SMAD4-206ENST00000588860 CLEC14AQ86T13 490 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 MFSD6LQ8IWD5 586 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 EFHBQ8N7U6 833 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 RFWD2Q8NHY2 731 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 BRSK1Q8TDC3 778 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 PDCD6IPQ8WUM4 868 aaKnown RBP8.8□□□□□ -1
SMAD4-206ENST00000588860 ALG14Q96F25 216 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 SCYL1Q96KG9 808 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 C2orf49Q9BVC5 232 aaPredicted RBP8.8□□□□□ -1
SMAD4-206ENST00000588860 ADGRE3Q9BY15 652 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 TRIM55Q9BYV6 548 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 ACTR5Q9H9F9 607 aaPredicted RBP8.8□□□□□ -1
SMAD4-206ENST00000588860 ZNF358Q9NW07 568 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 DNMT3BQ9UBC3 853 aaKnown RBP8.8□□□□□ -1
SMAD4-206ENST00000588860 CCL26Q9Y258 94 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 PCDHGC4Q9Y5F7 938 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 PIKFYVEQ9Y2I7 2098 aa8.8□□□□□ -1
SMAD4-206ENST00000588860 A0A087X1B8 175 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 GRXCR1A8MXD5 290 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 K7ERQ8 282 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 MYO1CO00159 1063 aa8.79□□□□□ -1
SMAD4-206ENST00000588860 AURKAO14965 403 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms