RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 SRLQ86TD4 932 aa16.91■□□□□ 0.3
LINC01842-201ENST00000588275 TSEN2Q8NCE0 465 aaKnown RBP16.91■□□□□ 0.3
LINC01842-201ENST00000588275 HCAR2Q8TDS4 363 aa16.91■□□□□ 0.3
LINC01842-201ENST00000588275 ZNF641Q96N77 438 aaPredicted RBP16.91■□□□□ 0.3
LINC01842-201ENST00000588275 CINPQ9BW66 212 aaPredicted RBP16.91■□□□□ 0.3
LINC01842-201ENST00000588275 SLC39A8Q9C0K1 460 aa16.91■□□□□ 0.3
LINC01842-201ENST00000588275 LRRN3Q9H3W5 708 aa16.91■□□□□ 0.3
LINC01842-201ENST00000588275 DHX35Q9H5Z1 703 aaKnown RBP16.91■□□□□ 0.3
LINC01842-201ENST00000588275 LRRC19Q9H756 370 aa16.91■□□□□ 0.3
LINC01842-201ENST00000588275 ATP13A3Q9H7F0 1226 aa16.91■□□□□ 0.3
LINC01842-201ENST00000588275 SP110Q9HB58 689 aa16.91■□□□□ 0.3
LINC01842-201ENST00000588275 MRPL40Q9NQ50 206 aaKnown RBP16.91■□□□□ 0.3
LINC01842-201ENST00000588275 PISDQ9UG56 409 aa16.91■□□□□ 0.3
LINC01842-201ENST00000588275 LGALS16A8MUM7 142 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 A8MX80 341 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 TMCO5BA8MYB1 307 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 B4DGG1 531 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 PYCARD-AS1I3L0S3 204 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 DFFAO00273 331 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 RECQL5O94762 991 aaPredicted RBP16.9■□□□□ 0.3
LINC01842-201ENST00000588275 ELFN1P0C7U0 828 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 CDK11BP21127 795 aaKnown RBP16.9■□□□□ 0.3
LINC01842-201ENST00000588275 PSMA2P25787 234 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 NDST2P52849 883 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 OGDHQ02218 1023 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 EIF3IQ13347 325 aaKnown RBP16.9■□□□□ 0.3
LINC01842-201ENST00000588275 CA9Q16790 459 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 PPP1R15BQ5SWA1 713 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 CCNJLQ8IV13 435 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 MCOLN2Q8IZK6 566 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 FAM46DQ8NEK8 389 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 OR6C4Q8NGE1 309 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 SNRNP27Q8WVK2 155 aaKnown RBP16.9■□□□□ 0.3
LINC01842-201ENST00000588275 OR1E3Q8WZA6 343 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 TMEM74Q96NL1 305 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 TUBGCP5Q96RT8 1024 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 CCNL2Q96S94 520 aaPredicted RBP16.9■□□□□ 0.3
LINC01842-201ENST00000588275 RBM15Q96T37 977 aaKnown RBP eCLIP16.9■□□□□ 0.3
LINC01842-201ENST00000588275 SUDS3Q9H7L9 328 aaPredicted RBP16.9■□□□□ 0.3
LINC01842-201ENST00000588275 DONSONQ9NYP3 566 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 PCSK1NQ9UHG2 260 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 ATXN7L1Q9ULK2 861 aaPredicted RBP16.9■□□□□ 0.3
LINC01842-201ENST00000588275 SSUH2Q9Y2M2 353 aa16.9■□□□□ 0.3
LINC01842-201ENST00000588275 TENM4Q6N022 2769 aa16.89■□□□□ 0.3
LINC01842-201ENST00000588275 TMEM202A6NGA9 273 aa16.89■□□□□ 0.29
LINC01842-201ENST00000588275 TMX2-CTNND1H3BSU7 103 aa16.89■□□□□ 0.29
LINC01842-201ENST00000588275 ATMINO43313 823 aaPredicted RBP16.89■□□□□ 0.29
LINC01842-201ENST00000588275 BCL2L1Q07817 233 aa16.89■□□□□ 0.29
LINC01842-201ENST00000588275 ACAD10Q6JQN1 1059 aa16.89■□□□□ 0.29
LINC01842-201ENST00000588275 SFTPA2Q8IWL1 248 aa16.89■□□□□ 0.29
LINC01842-201ENST00000588275 OR56A4Q8NGH8 313 aa16.89■□□□□ 0.29
LINC01842-201ENST00000588275 FUBP1Q96AE4 644 aaKnown RBP16.89■□□□□ 0.29
LINC01842-201ENST00000588275 MED8Q96G25 268 aa16.89■□□□□ 0.29
LINC01842-201ENST00000588275 FGF22Q9HCT0 170 aa16.89■□□□□ 0.29
LINC01842-201ENST00000588275 ASH1LQ9NR48 2969 aaKnown RBP16.89■□□□□ 0.29
LINC01842-201ENST00000588275 LOXL2Q9Y4K0 774 aa16.89■□□□□ 0.29
LINC01842-201ENST00000588275 UNC13CQ8NB66 2214 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 PIEZO2Q9H5I5 2752 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 TEX33O43247 280 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 FERP16591 822 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 ITIH1P19827 911 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 KELP23276 732 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 HTR7P34969 479 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 KIAA1024LP59773 190 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 MYL5Q02045 173 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 RALGDSQ12967 914 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 ACOX1Q15067 660 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 AGERQ15109 404 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 TGIF1Q15583 401 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 PPP6R3Q5H9R7 873 aaPredicted RBP16.88■□□□□ 0.29
LINC01842-201ENST00000588275 ARHGAP36Q6ZRI8 547 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 GPR156Q8NFN8 814 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 KCTD15Q96SI1 283 aaPredicted RBP16.88■□□□□ 0.29
LINC01842-201ENST00000588275 SNRNP25Q9BV90 132 aaKnown RBP16.88■□□□□ 0.29
LINC01842-201ENST00000588275 TMEM168Q9H0V1 697 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 DPEP2Q9H4A9 486 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 CYP4F12Q9HCS2 524 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 TAS2R14Q9NYV8 317 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 LIMA1Q9UHB6 759 aaKnown RBP16.88■□□□□ 0.29
LINC01842-201ENST00000588275 PCDHGA7Q9Y5G6 932 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 DGKBQ9Y6T7 804 aa16.88■□□□□ 0.29
LINC01842-201ENST00000588275 B8ZZF3 427 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 SLC28A2O43868 658 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 CCDC172P0C7W6 258 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 TNFAIP3P21580 790 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 CCKBRP32239 447 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 SCNN1BP51168 640 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 MAPK10P53779 464 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 SRSF6Q13247 344 aaKnown RBP16.87■□□□□ 0.29
LINC01842-201ENST00000588275 ARHGEF7Q14155 803 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 CERCAMQ5T4B2 595 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 ERMARDQ5T6L9 678 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 PHF19Q5T6S3 580 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 DENND2CQ68D51 928 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 SASS6Q6UVJ0 657 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 LIPIQ6XZB0 460 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 RFX8Q6ZV50 586 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 CCL4L1Q8NHW4 92 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 PEBP4Q96S96 227 aa16.87■□□□□ 0.29
LINC01842-201ENST00000588275 WDR26Q9H7D7 661 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms