RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 ARMC12Q5T9G4 340 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 CGB2Q6NT52 195 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 LCA5Q86VQ0 697 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 MDGA1Q8NFP4 955 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 RAB3IL1Q8TBN0 382 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 MYO19Q96H55 970 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 GDF15Q99988 308 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 SLC28A3Q9HAS3 691 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 EVLQ9UI08 416 aaPredicted RBP16.59■□□□□ 0.25
NFIX-210ENST00000588228 SLC25A13Q9UJS0 675 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 TLK1Q9UKI8 766 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 RPL26L1Q9UNX3 145 aaKnown RBP16.59■□□□□ 0.25
NFIX-210ENST00000588228 CCDC162PA2VCL2 907 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 CCL22O00626 93 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 AURKAO14965 403 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 HTRA2O43464 458 aaPredicted RBP16.59■□□□□ 0.25
NFIX-210ENST00000588228 BUD23O43709 281 aaKnown RBP16.59■□□□□ 0.25
NFIX-210ENST00000588228 SOCS5O75159 536 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 PGLSO95336 258 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 CTSOP43234 321 aaPredicted RBP16.59■□□□□ 0.25
NFIX-210ENST00000588228 RAB10P61026 200 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 SNRPD1P62314 119 aaKnown RBP16.59■□□□□ 0.25
NFIX-210ENST00000588228 TMPRSS15P98073 1019 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 POU4F1Q01851 419 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 BCL2L1Q07817 233 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 DGKKQ5KSL6 1271 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 MRNIPQ6NTE8 343 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 C16orf46Q6P387 395 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 CNSTQ6PJW8 725 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 C6orf89Q6UWU4 347 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 RAPH1Q70E73 1250 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 NUDCD3Q8IVD9 361 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 SLC41A1Q8IVJ1 513 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.59■□□□□ 0.25
NFIX-210ENST00000588228 CCDC63Q8NA47 563 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 OR2AP1Q8NGE2 309 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 SCG3Q8WXD2 468 aaKnown RBP16.59■□□□□ 0.25
NFIX-210ENST00000588228 PPP2R3CQ969Q6 453 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 CDKN2AIPNLQ96HQ2 116 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 CEP44Q9C0F1 390 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 TMEM216Q9P0N5 145 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 PCDHB9Q9Y5E1 797 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 CHD7Q9P2D1 2997 aa16.59■□□□□ 0.25
NFIX-210ENST00000588228 EPOPA6NHQ4 379 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 TRAFD1O14545 582 aaPredicted RBP16.58■□□□□ 0.24
NFIX-210ENST00000588228 IL1BP01584 269 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 PROCP04070 461 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 COL6A2P12110 1019 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 STMN1P16949 149 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 OGNP20774 298 aaKnown RBP16.58■□□□□ 0.24
NFIX-210ENST00000588228 LPOP22079 712 aaPredicted RBP16.58■□□□□ 0.24
NFIX-210ENST00000588228 CRABP2P29373 138 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 SLC8A1P32418 973 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 STK19P49842 368 aaPredicted RBP16.58■□□□□ 0.24
NFIX-210ENST00000588228 EPHB1P54762 984 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 PTPRCAPQ14761 206 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 ATG16L1Q676U5 607 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 AFTPHQ6ULP2 937 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 KIAA0907Q7Z7F0 614 aaPredicted RBP16.58■□□□□ 0.24
NFIX-210ENST00000588228 CAMK1DQ8IU85 385 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 MFSD6LQ8IWD5 586 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 NPAS3Q8IXF0 933 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 GPATCH11Q8N954 259 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 OR4L1Q8NH43 312 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 PIH1D2Q8WWB5 315 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 E2F7Q96AV8 911 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 ELMO2Q96JJ3 720 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 RPL10LQ96L21 214 aaKnown RBP16.58■□□□□ 0.24
NFIX-210ENST00000588228 LRRC3BQ96PB8 259 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 MECRQ9BV79 373 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 TNKS2Q9H2K2 1166 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 ATP13A3Q9H7F0 1226 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 SUDS3Q9H7L9 328 aaPredicted RBP16.58■□□□□ 0.24
NFIX-210ENST00000588228 MAGEE1Q9HCI5 957 aa16.58■□□□□ 0.24
NFIX-210ENST00000588228 DUS2Q9NX74 493 aaKnown RBP16.58■□□□□ 0.24
NFIX-210ENST00000588228 MARCH4Q9P2E8 410 aaPredicted RBP16.58■□□□□ 0.24
NFIX-210ENST00000588228 ATXN2Q99700 1313 aaKnown RBP16.58■□□□□ 0.24
NFIX-210ENST00000588228 CHD9Q3L8U1 2897 aa16.57■□□□□ 0.24
NFIX-210ENST00000588228 OR51F1A6NGY5 319 aa16.57■□□□□ 0.24
NFIX-210ENST00000588228 CD3EAPO15446 510 aaKnown RBP16.57■□□□□ 0.24
NFIX-210ENST00000588228 S1PR4O95977 384 aa16.57■□□□□ 0.24
NFIX-210ENST00000588228 GSRP00390 522 aa16.57■□□□□ 0.24
NFIX-210ENST00000588228 SLC35E2BP0CK96 405 aa16.57■□□□□ 0.24
NFIX-210ENST00000588228 SAT1P21673 171 aa16.57■□□□□ 0.24
NFIX-210ENST00000588228 FSHRP23945 695 aa16.57■□□□□ 0.24
NFIX-210ENST00000588228 ABL2P42684 1182 aa16.57■□□□□ 0.24
NFIX-210ENST00000588228 SLC12A2P55011 1212 aa16.57■□□□□ 0.24
NFIX-210ENST00000588228 IRX4P78413 519 aa16.57■□□□□ 0.24
NFIX-210ENST00000588228 ECT2LQ008S8 904 aa16.57■□□□□ 0.24
NFIX-210ENST00000588228 IRF9Q00978 393 aa16.57■□□□□ 0.24
NFIX-210ENST00000588228 DHCR24Q15392 516 aa16.57■□□□□ 0.24
NFIX-210ENST00000588228 ZNF789Q5FWF6 425 aa16.57■□□□□ 0.24
NFIX-210ENST00000588228 C22orf39Q6P5X5 142 aa16.57■□□□□ 0.24
NFIX-210ENST00000588228 OTOAQ7RTW8 1153 aa16.57■□□□□ 0.24
NFIX-210ENST00000588228 AHI1Q8N157 1196 aa16.57■□□□□ 0.24
NFIX-210ENST00000588228 PLD6Q8N2A8 252 aaKnown RBP16.57■□□□□ 0.24
NFIX-210ENST00000588228 TTC30BQ8N4P2 665 aa16.57■□□□□ 0.24
NFIX-210ENST00000588228 PCDH20Q8N6Y1 951 aaKnown RBP16.57■□□□□ 0.24
NFIX-210ENST00000588228 EFHBQ8N7U6 833 aa16.57■□□□□ 0.24
NFIX-210ENST00000588228 OR4K2Q8NGD2 314 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms