RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 ITPKAP23677 461 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 CCNCP24863 283 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 RBL1P28749 1068 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 WASP42768 502 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 TNFRSF4P43489 277 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 KCNJ1P48048 391 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 ATXN3P54252 364 aaPredicted RBP8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 GEMIN4P57678 1058 aaKnown RBP8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 ST8SIA6P61647 398 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 CYP4F3Q08477 520 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 SLC10A7Q0GE19 358 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 XRCC4Q13426 336 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 ZNF235Q14590 738 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 EIF4HQ15056 248 aaKnown RBP8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 PRKD1Q15139 912 aaPredicted RBP8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 CCNG2Q16589 344 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 KCTD19Q17RG1 926 aaPredicted RBP8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 ACCSLQ4AC99 568 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 FBXO43Q4G163 708 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 C2orf27AQ580R0 203 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 PEAR1Q5VY43 1037 aaPredicted RBP8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 EGFLAMQ63HQ2 1017 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 TIGD7Q6NT04 549 aaPredicted RBP8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 LPCAT2Q7L5N7 544 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 GSTA5Q7RTV2 222 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 LRRC49Q8IUZ0 686 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 ZNF366Q8N895 744 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 ZNF513Q8N8E2 541 aaPredicted RBP8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 ATP11CQ8NB49 1132 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 SLC35B2Q8TB61 432 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 HTR3CQ8WXA8 447 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 TSGA13Q96PP4 275 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 FERMT1Q9BQL6 677 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 TMEM121Q9BTD3 319 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 CINPQ9BW66 212 aaPredicted RBP8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 FRMD8P1Q9BZ68 369 aaPredicted RBP8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 BRD8Q9H0E9 1235 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 DDX47Q9H0S4 455 aaKnown RBP8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 PDFQ9HBH1 243 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 CAPN10Q9HC96 672 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 HOMER3Q9NSC5 361 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 RNF14Q9UBS8 474 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 SLCO3A1Q9UIG8 710 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 TTLL3Q9Y4R7 772 aa8.54□□□□□ -1.04
NEDD4L-218ENST00000587547 TTC34A8MYJ7 566 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 F5H423 210 aaPredicted RBP8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 RNF103O00237 685 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 MATN3O15232 486 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 TIMM44O43615 452 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 STK10O94804 968 aaKnown RBP8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 KLF8O95600 359 aaPredicted RBP8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 IFNB1P01574 187 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 SRPRAP08240 638 aaKnown RBP8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 SRCP12931 536 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 HLA-EP13747 358 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 CCNB1P14635 433 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 PTPN3P26045 913 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 ITPKBP27987 946 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 COILP38432 576 aaPredicted RBP8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 NNMTP40261 264 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 P2RY2P41231 377 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 MMP13P45452 471 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 ABCG1P45844 678 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 SERPINH1P50454 418 aaKnown RBP8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 RHOAP61586 193 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 ITKQ08881 620 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 POU4F2Q12837 409 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 ZBTB17Q13105 803 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 TUBB2AQ13885 445 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 ZNF234Q14588 700 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 LBRQ14739 615 aaKnown RBP8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 CYTH1Q15438 398 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 OASLQ15646 514 aaKnown RBP8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 ATXN7L2Q5T6C5 722 aaPredicted RBP8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 LYSMD4Q5XG99 296 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 TTC27Q6P3X3 843 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 C22orf39Q6P5X5 142 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 CCDC137Q6PK04 289 aaKnown RBP8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 SERPINA13PQ6UXR4 307 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 PRICKLE2Q7Z3G6 844 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 TREML1Q86YW5 311 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 CHPFQ8IZ52 775 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 BBS5Q8N3I7 341 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 RYBPQ8N488 228 aaPredicted RBP8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 TAB3Q8N5C8 712 aaPredicted RBP8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 SH2D3CQ8N5H7 860 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 FAM71DQ8N9W8 422 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 RNF217Q8TC41 542 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 EXOC2Q96KP1 924 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 MRGPRX3Q96LB0 322 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 DMRTB1Q96MA1 342 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 ZNF599Q96NL3 588 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 ACOX2Q99424 681 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 KRT12Q99456 494 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 TUBB2BQ9BVA1 445 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 CARD6Q9BX69 1037 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 TM6SF2Q9BZW4 377 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 TNKS2Q9H2K2 1166 aa8.53□□□□□ -1.04
NEDD4L-218ENST00000587547 MTG2Q9H4K7 406 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 288.7 ms