RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 SAT1P21673 171 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 SNRPD1P62314 119 aaKnown RBP19.92■□□□□ 0.78
TRIM47-204ENST00000587339 ECT2LQ008S8 904 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 USP10Q14694 798 aaKnown RBP19.92■□□□□ 0.78
TRIM47-204ENST00000587339 DLG2Q15700 870 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 INSCQ1MX18 579 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 MICALCLQ6ZW33 695 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 GET4Q7L5D6 327 aaPredicted RBP19.92■□□□□ 0.78
TRIM47-204ENST00000587339 GPR149Q86SP6 731 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 SMARCD2Q92925 531 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 ISG20Q96AZ6 181 aaKnown RBP19.92■□□□□ 0.78
TRIM47-204ENST00000587339 MYO19Q96H55 970 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 SMIM14Q96QK8 99 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 PITPNM3Q9BZ71 974 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 SUDS3Q9H7L9 328 aaPredicted RBP19.92■□□□□ 0.78
TRIM47-204ENST00000587339 NLE1Q9NVX2 485 aaPredicted RBP19.92■□□□□ 0.78
TRIM47-204ENST00000587339 MYOFQ9NZM1 2061 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 OR51F1A6NGY5 319 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 PGLSO95336 258 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 GLP2RO95838 553 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 NEFHP12036 1026 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 ABL2P42684 1182 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 GRIA4P48058 902 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 LEPRP48357 1165 aaKnown RBP19.92■□□□□ 0.78
TRIM47-204ENST00000587339 ZNF140P52738 457 aaPredicted RBP19.92■□□□□ 0.78
TRIM47-204ENST00000587339 ACCSLQ4AC99 568 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 TRIM68Q6AZZ1 485 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 FAM47EQ6ZV65 393 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 RAPH1Q70E73 1250 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 ADIPOR2Q86V24 386 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 AHI1Q8N157 1196 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 PAF1Q8N7H5 531 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 EFHBQ8N7U6 833 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 BPIFB1Q8TDL5 484 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 TIFAQ96CG3 184 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 SEC16BQ96JE7 1060 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 ELAC2Q9BQ52 826 aaKnown RBP19.92■□□□□ 0.78
TRIM47-204ENST00000587339 ATP13A3Q9H7F0 1226 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 MANSC1Q9H8J5 431 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 FBXO6Q9NRD1 293 aaPredicted RBP19.92■□□□□ 0.78
TRIM47-204ENST00000587339 HACD3Q9P035 362 aa19.92■□□□□ 0.78
TRIM47-204ENST00000587339 NUP210Q8TEM1 1887 aaPredicted RBP19.91■□□□□ 0.78
TRIM47-204ENST00000587339 FAM95CA0A1B0GW59 222 aa19.91■□□□□ 0.78
TRIM47-204ENST00000587339 SOCS5O75159 536 aa19.91■□□□□ 0.78
TRIM47-204ENST00000587339 PIGNO95427 931 aa19.91■□□□□ 0.78
TRIM47-204ENST00000587339 GOT2P00505 430 aaKnown RBP19.91■□□□□ 0.78
TRIM47-204ENST00000587339 SLC4A1P02730 911 aa19.91■□□□□ 0.78
TRIM47-204ENST00000587339 CYP17A1P05093 508 aa19.91■□□□□ 0.78
TRIM47-204ENST00000587339 C2P06681 752 aa19.91■□□□□ 0.78
TRIM47-204ENST00000587339 GKP32189 559 aa19.91■□□□□ 0.78
TRIM47-204ENST00000587339 POLD2P49005 469 aa19.91■□□□□ 0.78
TRIM47-204ENST00000587339 N4BP2L1Q5TBK1 243 aaPredicted RBP19.91■□□□□ 0.78
TRIM47-204ENST00000587339 C22orf39Q6P5X5 142 aa19.91■□□□□ 0.78
TRIM47-204ENST00000587339 TMEM184AQ6ZMB5 413 aa19.91■□□□□ 0.78
TRIM47-204ENST00000587339 PIGWQ7Z7B1 504 aa19.91■□□□□ 0.78
TRIM47-204ENST00000587339 GALNT7Q86SF2 657 aa19.91■□□□□ 0.78
TRIM47-204ENST00000587339 CACNA2D3Q8IZS8 1091 aa19.91■□□□□ 0.78
TRIM47-204ENST00000587339 CCDC63Q8NA47 563 aa19.91■□□□□ 0.78
TRIM47-204ENST00000587339 OR4K2Q8NGD2 314 aa19.91■□□□□ 0.78
TRIM47-204ENST00000587339 CDKN2AIPNLQ96HQ2 116 aa19.91■□□□□ 0.78
TRIM47-204ENST00000587339 GDE1Q9NZC3 331 aa19.91■□□□□ 0.78
TRIM47-204ENST00000587339 CDH22Q9UJ99 828 aa19.91■□□□□ 0.78
TRIM47-204ENST00000587339 TLK1Q9UKI8 766 aa19.91■□□□□ 0.78
TRIM47-204ENST00000587339 C2orf16Q68DN1 1984 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 ANKRD36A6QL64 1941 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 CCDC162PA2VCL2 907 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 TRAFD1O14545 582 aaPredicted RBP19.9■□□□□ 0.78
TRIM47-204ENST00000587339 TRIM24O15164 1050 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 ADH1CP00326 375 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 ADH5P11766 374 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 LPOP22079 712 aaPredicted RBP19.9■□□□□ 0.78
TRIM47-204ENST00000587339 EML3Q32P44 896 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 MBLAC2Q68D91 279 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 MRNIPQ6NTE8 343 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 CNSTQ6PJW8 725 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.9■□□□□ 0.78
TRIM47-204ENST00000587339 GPATCH11Q8N954 259 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 OR4L1Q8NH43 312 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 CEP44Q9C0F1 390 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 NSUN3Q9H649 340 aaKnown RBP19.9■□□□□ 0.78
TRIM47-204ENST00000587339 SLCO1B3Q9NPD5 702 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 MARCH4Q9P2E8 410 aaPredicted RBP19.9■□□□□ 0.78
TRIM47-204ENST00000587339 CD3EAPO15446 510 aaKnown RBP19.9■□□□□ 0.78
TRIM47-204ENST00000587339 LINC01565O15544 149 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 HTRA2O43464 458 aaPredicted RBP19.9■□□□□ 0.78
TRIM47-204ENST00000587339 BNIP3LO60238 219 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 GSTA1P08263 222 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 POLR2EP19388 210 aaKnown RBP19.9■□□□□ 0.78
TRIM47-204ENST00000587339 SERPINA4P29622 427 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 RPL26P61254 145 aaKnown RBP19.9■□□□□ 0.78
TRIM47-204ENST00000587339 HYAL1Q12794 435 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 ZNF789Q5FWF6 425 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 C16orf46Q6P387 395 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 KIAA0907Q7Z7F0 614 aaPredicted RBP19.9■□□□□ 0.78
TRIM47-204ENST00000587339 SLC41A1Q8IVJ1 513 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 PCDH20Q8N6Y1 951 aaKnown RBP19.9■□□□□ 0.78
TRIM47-204ENST00000587339 PIH1D2Q8WWB5 315 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 ELMO2Q96JJ3 720 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 HECAQ9UBI9 543 aaPredicted RBP19.9■□□□□ 0.78
TRIM47-204ENST00000587339 SLCO3A1Q9UIG8 710 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms