RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 ATP8A1Q9Y2Q0 1164 aa8.08□□□□□ -1.12
CAPNS1-203ENST00000586963 OR1A2Q9Y585 309 aa8.08□□□□□ -1.12
CAPNS1-203ENST00000586963 AHCTF1Q8WYP5 2266 aa8.08□□□□□ -1.12
CAPNS1-203ENST00000586963 ARHGAP42A6NI28 874 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 EIF3CLB5ME19 914 aaKnown RBP8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 J3KR12 359 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 CACNB4O00305 520 aaPredicted RBP8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 RECQL5O94762 991 aaPredicted RBP8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 ITGB2P05107 769 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 PCCBP05166 539 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 JMJD7P0C870 316 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 LIPCP11150 499 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 DESP17661 470 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 KELP23276 732 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 SERPINA4P29622 427 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 KIAA1024LP59773 190 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 RPL7AP62424 266 aaKnown RBP8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 POLR2LP62875 67 aaKnown RBP8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 KCNC4Q03721 635 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 NSUN2Q08J23 767 aaKnown RBP eCLIP8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 HLTFQ14527 1009 aaKnown RBP eCLIP8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 RFTN1Q14699 578 aaPredicted RBP8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 SYCP1Q15431 976 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 CERCAMQ5T4B2 595 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 AFMIDQ63HM1 303 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 DNAJC24Q6P3W2 148 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 LIPIQ6XZB0 460 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 TAF8Q7Z7C8 310 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 SRLQ86TD4 932 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 ZSWIM9Q86XI8 627 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 JAMLQ86YT9 394 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 CAMK1DQ8IU85 385 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 CCNJLQ8IV13 435 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 PLA2G15Q8NCC3 412 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 FAM46DQ8NEK8 389 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 OR1E3Q8WZA6 343 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 FUBP1Q96AE4 644 aaKnown RBP8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 ECHDC3Q96DC8 303 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 SGF29Q96ES7 293 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 PDXPQ96GD0 296 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 EIF3CQ99613 913 aaKnown RBP8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 FOXP3Q9BZS1 431 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 B3GNT4Q9C0J1 378 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 CLMPQ9H6B4 373 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 ATP13A3Q9H7F0 1226 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 SEPT10Q9P0V9 454 aa8.07□□□□□ -1.12
CAPNS1-203ENST00000586963 A0A1W2PQC6 194 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 TMEM202A6NGA9 273 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 LRRC10BA6NIK2 292 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 PDE2AO00408 941 aaPredicted RBP8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 NUDT21O43809 227 aaKnown RBP8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 PALMO75781 387 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 WISP1O95388 367 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 SFTPCP11686 197 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 CD82P27701 267 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 RGRP47804 291 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 PAPOLAP51003 745 aaKnown RBP8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 TPI1P60174 286 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 BCL2L1Q07817 233 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 RALGDSQ12967 914 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 ARHGEF7Q14155 803 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 TGIF1Q15583 401 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 CLPPQ16740 277 aaPredicted RBP8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 TSR1Q2NL82 804 aaKnown RBP8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 LINC00303Q3SY05 128 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 C14orf28Q4W4Y0 310 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 KCTD16Q68DU8 428 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 ACAD10Q6JQN1 1059 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 PPP1R2P3Q6NXS1 205 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 DCUN1D2Q6PH85 259 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 NYAP1Q6ZVC0 841 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 USP53Q70EK8 1073 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 SPRED1Q7Z699 444 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 SLITRK4Q8IW52 837 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 MCOLN2Q8IZK6 566 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 Q8N9G6 341 aaPredicted RBP8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 EXD3Q8N9H8 876 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 TSEN2Q8NCE0 465 aaKnown RBP8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 NEK11Q8NG66 645 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 SPOCK2Q92563 424 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 MCEEQ96PE7 176 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 CMKLR1Q99788 373 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 AGPAT1Q99943 283 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 SLC39A8Q9C0K1 460 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 TMEM168Q9H0V1 697 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 FGF22Q9HCT0 170 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 KCTD5Q9NXV2 234 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 LRIT1Q9P2V4 623 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 PISDQ9UG56 409 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 LOXL2Q9Y4K0 774 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 RNF215Q9Y6U7 377 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 MYO18BQ8IUG5 2567 aa8.06□□□□□ -1.12
CAPNS1-203ENST00000586963 BSNQ9UPA5 3926 aa8.05□□□□□ -1.12
CAPNS1-203ENST00000586963 KIF26BQ2KJY2 2108 aa8.05□□□□□ -1.12
CAPNS1-203ENST00000586963 A0A1W2PQ67 120 aa8.05□□□□□ -1.12
CAPNS1-203ENST00000586963 LGALS16A8MUM7 142 aa8.05□□□□□ -1.12
CAPNS1-203ENST00000586963 EEF2KO00418 725 aaKnown RBP8.05□□□□□ -1.12
CAPNS1-203ENST00000586963 TRAFD1O14545 582 aaPredicted RBP8.05□□□□□ -1.12
CAPNS1-203ENST00000586963 ZW10O43264 779 aa8.05□□□□□ -1.12
CAPNS1-203ENST00000586963 SLC28A2O43868 658 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms