RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 ZNF217O75362 1048 aa17.04■□□□□ 0.32
PRKCSH-203ENST00000586486 XPAP23025 273 aaPredicted RBP17.04■□□□□ 0.32
PRKCSH-203ENST00000586486 MMP12P39900 470 aa17.04■□□□□ 0.32
PRKCSH-203ENST00000586486 MAGEA3P43357 314 aa17.04■□□□□ 0.32
PRKCSH-203ENST00000586486 ELP6Q0PNE2 266 aa17.04■□□□□ 0.32
PRKCSH-203ENST00000586486 ERAP2Q6P179 960 aa17.04■□□□□ 0.32
PRKCSH-203ENST00000586486 SLC25A41Q8N5S1 370 aa17.04■□□□□ 0.32
PRKCSH-203ENST00000586486 OR52K1Q8NGK4 314 aa17.04■□□□□ 0.32
PRKCSH-203ENST00000586486 SERPINB12Q96P63 405 aa17.04■□□□□ 0.32
PRKCSH-203ENST00000586486 NEUROG2Q9H2A3 272 aa17.04■□□□□ 0.32
PRKCSH-203ENST00000586486 MAGEE1Q9HCI5 957 aa17.04■□□□□ 0.32
PRKCSH-203ENST00000586486 PCDH12Q9NPG4 1184 aa17.04■□□□□ 0.32
PRKCSH-203ENST00000586486 MYLKQ15746 1914 aa17.04■□□□□ 0.32
PRKCSH-203ENST00000586486 CACNA1IQ9P0X4 2223 aa17.04■□□□□ 0.32
PRKCSH-203ENST00000586486 PLRG1O43660 514 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 TAS2R38P59533 333 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 MSLNQ13421 630 aaPredicted RBP17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 CUL1Q13616 776 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 TRADDQ15628 312 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 ZDHHC24Q6UX98 284 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 DPPA4Q7L190 304 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 CAND1Q86VP6 1230 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 IFT20Q8IY31 132 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 MAML2Q8IZL2 1156 aaPredicted RBP17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 DNAAF3Q8N9W5 541 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 KDM4CQ9H3R0 1056 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 TRABDQ9H4I3 376 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 ZDHHC18Q9NUE0 388 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 HACD3Q9P035 362 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 FBXO4Q9UKT5 387 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 FADS3Q9Y5Q0 445 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 EML5Q05BV3 1969 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 FAM86C2PA6NEL3 165 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 NPIPB15A6NHN6 443 aaPredicted RBP17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 PPFIA2O75334 1257 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 ALPIP09923 528 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 CYP2A6P11509 494 aaPredicted RBP17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 CTPS1P17812 591 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 OXTRP30559 389 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 HNF1BP35680 557 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 ADPRHP54922 357 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 CBLBQ13191 982 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 LRRC73Q5JTD7 316 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 ARMC3Q5W041 872 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 ZCCHC9Q8N567 271 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 FBXO25Q8TCJ0 367 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 GANCQ8TET4 914 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 UBXN4Q92575 508 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 HINFPQ9BQA5 517 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 SGK2Q9HBY8 427 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 CD93Q9NPY3 652 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 B4GALT6Q9UBX8 382 aa17.03■□□□□ 0.32
PRKCSH-203ENST00000586486 H0Y858 1186 aa17.02■□□□□ 0.31
PRKCSH-203ENST00000586486 GOLGA8MH3BSY2 632 aa17.02■□□□□ 0.31
PRKCSH-203ENST00000586486 AXIN1O15169 862 aa17.02■□□□□ 0.31
PRKCSH-203ENST00000586486 TSPAN6O43657 245 aa17.02■□□□□ 0.31
PRKCSH-203ENST00000586486 ZNF30P17039 623 aa17.02■□□□□ 0.31
PRKCSH-203ENST00000586486 VIPR1P32241 457 aa17.02■□□□□ 0.31
PRKCSH-203ENST00000586486 NPY2RP49146 381 aa17.02■□□□□ 0.31
PRKCSH-203ENST00000586486 NUBP1P53384 320 aa17.02■□□□□ 0.31
PRKCSH-203ENST00000586486 PLTPP55058 493 aa17.02■□□□□ 0.31
PRKCSH-203ENST00000586486 RALGDSQ12967 914 aa17.02■□□□□ 0.31
PRKCSH-203ENST00000586486 CDKN3Q16667 212 aa17.02■□□□□ 0.31
PRKCSH-203ENST00000586486 EIF1ADQ8N9N8 165 aaKnown RBP17.02■□□□□ 0.31
PRKCSH-203ENST00000586486 TPSD1Q9BZJ3 242 aa17.02■□□□□ 0.31
PRKCSH-203ENST00000586486 FOXP3Q9BZS1 431 aa17.02■□□□□ 0.31
PRKCSH-203ENST00000586486 PHACTR1Q9C0D0 580 aa17.02■□□□□ 0.31
PRKCSH-203ENST00000586486 ANKZF1Q9H8Y5 726 aa17.02■□□□□ 0.31
PRKCSH-203ENST00000586486 PIH1D1Q9NWS0 290 aaKnown RBP17.02■□□□□ 0.31
PRKCSH-203ENST00000586486 ZNF711Q9Y462 761 aa17.02■□□□□ 0.31
PRKCSH-203ENST00000586486 SPO11Q9Y5K1 396 aa17.02■□□□□ 0.31
PRKCSH-203ENST00000586486 SCN8AQ9UQD0 1980 aa17.01■□□□□ 0.31
PRKCSH-203ENST00000586486 PRKCGP05129 697 aa17.01■□□□□ 0.31
PRKCSH-203ENST00000586486 LHCGRP22888 699 aa17.01■□□□□ 0.31
PRKCSH-203ENST00000586486 PXNP49023 591 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-203ENST00000586486 FAM193AP78312 1265 aa17.01■□□□□ 0.31
PRKCSH-203ENST00000586486 HIF1AQ16665 826 aa17.01■□□□□ 0.31
PRKCSH-203ENST00000586486 TMEM52BQ4KMG9 183 aa17.01■□□□□ 0.31
PRKCSH-203ENST00000586486 PDIK1LQ8N165 341 aa17.01■□□□□ 0.31
PRKCSH-203ENST00000586486 SMIM14Q96QK8 99 aa17.01■□□□□ 0.31
PRKCSH-203ENST00000586486 RANBP9Q96S59 729 aa17.01■□□□□ 0.31
PRKCSH-203ENST00000586486 C1QTNF1Q9BXJ1 281 aa17.01■□□□□ 0.31
PRKCSH-203ENST00000586486 FAM126AQ9BYI3 521 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-203ENST00000586486 IL22Q9GZX6 179 aa17.01■□□□□ 0.31
PRKCSH-203ENST00000586486 BTBD1Q9H0C5 482 aa17.01■□□□□ 0.31
PRKCSH-203ENST00000586486 PREBQ9HCU5 417 aa17.01■□□□□ 0.31
PRKCSH-203ENST00000586486 BFARQ9NZS9 450 aa17.01■□□□□ 0.31
PRKCSH-203ENST00000586486 CYP8B1Q9UNU6 501 aa17.01■□□□□ 0.31
PRKCSH-203ENST00000586486 ITM2BQ9Y287 266 aa17.01■□□□□ 0.31
PRKCSH-203ENST00000586486 IGHV1OR15-9A0A0B4J2B8 117 aa17■□□□□ 0.31
PRKCSH-203ENST00000586486 C10orf142B7Z368 130 aa17■□□□□ 0.31
PRKCSH-203ENST00000586486 PIRTP0C851 137 aa17■□□□□ 0.31
PRKCSH-203ENST00000586486 TNFRSF8P28908 595 aa17■□□□□ 0.31
PRKCSH-203ENST00000586486 ECHS1P30084 290 aa17■□□□□ 0.31
PRKCSH-203ENST00000586486 ARL4CP56559 192 aa17■□□□□ 0.31
PRKCSH-203ENST00000586486 PTPRRQ15256 657 aa17■□□□□ 0.31
PRKCSH-203ENST00000586486 MAP7D1Q3KQU3 841 aa17■□□□□ 0.31
PRKCSH-203ENST00000586486 ZNF528Q3MIS6 628 aa17■□□□□ 0.31
PRKCSH-203ENST00000586486 TMEM31Q5JXX7 168 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms