RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 NSMCE4AQ9NXX6 385 aa20.56■□□□□ 0.88
ATG4D-204ENST00000586417 GGT7Q9UJ14 662 aa20.56■□□□□ 0.88
ATG4D-204ENST00000586417 CHKBQ9Y259 395 aa20.56■□□□□ 0.88
ATG4D-204ENST00000586417 TCF20Q9UGU0 1960 aaKnown RBP20.55■□□□□ 0.88
ATG4D-204ENST00000586417 TCP11X1B4DZS4 312 aa20.55■□□□□ 0.88
ATG4D-204ENST00000586417 LOC730098B7Z3J9 87 aa20.55■□□□□ 0.88
ATG4D-204ENST00000586417 K7ERQ8 282 aa20.55■□□□□ 0.88
ATG4D-204ENST00000586417 TPP1O14773 563 aa20.55■□□□□ 0.88
ATG4D-204ENST00000586417 ADH1CP00326 375 aa20.55■□□□□ 0.88
ATG4D-204ENST00000586417 ALADP13716 330 aa20.55■□□□□ 0.88
ATG4D-204ENST00000586417 TAC1P20366 129 aa20.55■□□□□ 0.88
ATG4D-204ENST00000586417 MAGEA12P43365 314 aa20.55■□□□□ 0.88
ATG4D-204ENST00000586417 HHATQ5VTY9 493 aa20.55■□□□□ 0.88
ATG4D-204ENST00000586417 NAIF1Q69YI7 327 aaPredicted RBP20.55■□□□□ 0.88
ATG4D-204ENST00000586417 NCEH1Q6PIU2 408 aa20.55■□□□□ 0.88
ATG4D-204ENST00000586417 ARIH1Q9Y4X5 557 aaPredicted RBP20.55■□□□□ 0.88
ATG4D-204ENST00000586417 PRKCGP05129 697 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 GABRB3P28472 473 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 HLA-FP30511 346 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 RHOAP61586 193 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 MESP2Q0VG99 397 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 PDK4Q16654 411 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 FSTL4Q6MZW2 842 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 RETSATQ6NUM9 610 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 RGS9BPQ6ZS82 235 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 NDUFAF2Q8N183 169 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 DCLK2Q8N568 766 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 CHFRQ96EP1 664 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 MTO1Q9Y2Z2 717 aaKnown RBP20.54■□□□□ 0.88
ATG4D-204ENST00000586417 RAI2Q9Y5P3 530 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 HOXC11O43248 304 aaPredicted RBP20.54■□□□□ 0.88
ATG4D-204ENST00000586417 SMAD6O43541 496 aaKnown RBP20.54■□□□□ 0.88
ATG4D-204ENST00000586417 VIMP08670 466 aaKnown RBP20.54■□□□□ 0.88
ATG4D-204ENST00000586417 CRHR1P34998 444 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 ABCG1P45844 678 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 CCT5P48643 541 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 ACVR1Q04771 509 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 TRAF2Q12933 501 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 SLC12A1Q13621 1099 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 NLRP9Q7RTR0 991 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 DENND6AQ8IWF6 608 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 FAM111AQ96PZ2 611 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 SLC13A1Q9BZW2 595 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 ABCB8Q9NUT2 735 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 PLLPQ9Y342 182 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 KCTD3Q9Y597 815 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 PCDHGC4Q9Y5F7 938 aa20.54■□□□□ 0.88
ATG4D-204ENST00000586417 ANKRD36A6QL64 1941 aa20.53■□□□□ 0.88
ATG4D-204ENST00000586417 TIMM44O43615 452 aa20.53■□□□□ 0.88
ATG4D-204ENST00000586417 NARSO43776 548 aaKnown RBP20.53■□□□□ 0.88
ATG4D-204ENST00000586417 PDHA1P08559 390 aa20.53■□□□□ 0.88
ATG4D-204ENST00000586417 SLC6A11P48066 632 aa20.53■□□□□ 0.88
ATG4D-204ENST00000586417 PDE1BQ01064 536 aa20.53■□□□□ 0.88
ATG4D-204ENST00000586417 PDE1CQ14123 709 aaPredicted RBP20.53■□□□□ 0.88
ATG4D-204ENST00000586417 PITRM1Q5JRX3 1037 aa20.53■□□□□ 0.88
ATG4D-204ENST00000586417 RALGPS1Q5JS13 557 aa20.53■□□□□ 0.88
ATG4D-204ENST00000586417 ATXN7L2Q5T6C5 722 aaPredicted RBP20.53■□□□□ 0.88
ATG4D-204ENST00000586417 CPLX4Q7Z7G2 160 aa20.53■□□□□ 0.88
ATG4D-204ENST00000586417 ZC3HC1Q86WB0 502 aaKnown RBP20.53■□□□□ 0.88
ATG4D-204ENST00000586417 CPA6Q8N4T0 437 aa20.53■□□□□ 0.88
ATG4D-204ENST00000586417 BRSK1Q8TDC3 778 aa20.53■□□□□ 0.88
ATG4D-204ENST00000586417 BLOC1S5Q8TDH9 187 aa20.53■□□□□ 0.88
ATG4D-204ENST00000586417 ATXN7L3BQ96GX2 97 aa20.53■□□□□ 0.88
ATG4D-204ENST00000586417 VPS39Q96JC1 886 aa20.53■□□□□ 0.88
ATG4D-204ENST00000586417 RHOJQ9H4E5 214 aa20.53■□□□□ 0.88
ATG4D-204ENST00000586417 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.53■□□□□ 0.88
ATG4D-204ENST00000586417 SPO11Q9Y5K1 396 aa20.53■□□□□ 0.88
ATG4D-204ENST00000586417 A0A0C4DFX4 3053 aa20.53■□□□□ 0.88
ATG4D-204ENST00000586417 CXorf51AA0A1B0GTR3 108 aa20.52■□□□□ 0.88
ATG4D-204ENST00000586417 TOP3BO95985 862 aaKnown RBP20.52■□□□□ 0.88
ATG4D-204ENST00000586417 AHSGP02765 367 aa20.52■□□□□ 0.88
ATG4D-204ENST00000586417 PIRTP0C851 137 aa20.52■□□□□ 0.88
ATG4D-204ENST00000586417 GJA4P35212 333 aa20.52■□□□□ 0.88
ATG4D-204ENST00000586417 SLC1A2P43004 574 aa20.52■□□□□ 0.88
ATG4D-204ENST00000586417 SOX9P48436 509 aa20.52■□□□□ 0.88
ATG4D-204ENST00000586417 ARSDP51689 593 aa20.52■□□□□ 0.88
ATG4D-204ENST00000586417 ZP2Q05996 745 aa20.52■□□□□ 0.88
ATG4D-204ENST00000586417 SEPT7Q16181 437 aaKnown RBP20.52■□□□□ 0.88
ATG4D-204ENST00000586417 FUT11Q495W5 492 aa20.52■□□□□ 0.88
ATG4D-204ENST00000586417 NEPROQ6NW34 567 aa20.52■□□□□ 0.88
ATG4D-204ENST00000586417 ADHFE1Q8IWW8 467 aa20.52■□□□□ 0.88
ATG4D-204ENST00000586417 ETFBKMTQ8IXQ9 262 aa20.52■□□□□ 0.88
ATG4D-204ENST00000586417 C2CD4AQ8NCU7 369 aaPredicted RBP20.52■□□□□ 0.88
ATG4D-204ENST00000586417 ACVR1CQ8NER5 493 aa20.52■□□□□ 0.88
ATG4D-204ENST00000586417 PEX13Q92968 403 aa20.52■□□□□ 0.88
ATG4D-204ENST00000586417 FAM167BQ9BTA0 163 aa20.52■□□□□ 0.88
ATG4D-204ENST00000586417 SNX15Q9NRS6 342 aa20.52■□□□□ 0.88
ATG4D-204ENST00000586417 RIMKLBQ9ULI2 386 aa20.52■□□□□ 0.88
ATG4D-204ENST00000586417 ARL5AQ9Y689 179 aa20.52■□□□□ 0.88
ATG4D-204ENST00000586417 TULP3O75386 442 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 ZNF821O75541 412 aaPredicted RBP20.51■□□□□ 0.87
ATG4D-204ENST00000586417 COL4A2P08572 1712 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 CSRP3P50461 194 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 MPP1Q00013 466 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 CTBP1Q13363 440 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 THOC5Q13769 683 aaKnown RBP20.51■□□□□ 0.87
ATG4D-204ENST00000586417 ITPRIPL2Q3MIP1 535 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 IER5LQ5T953 404 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 ZNF470Q6ECI4 717 aa20.51■□□□□ 0.87
ATG4D-204ENST00000586417 CMC1Q7Z7K0 106 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms