RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 SUOXP51687 545 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 GSCP56915 257 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-225ENST00000586385 JAM2P57087 298 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 KIAA1024LP59773 190 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 B4GALNT1Q00973 533 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 RAD51Q06609 339 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 ELP6Q0PNE2 266 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 MTM1Q13496 603 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 DPCR1Q3MIW9 517 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 WDR59Q6PJI9 974 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 XKR5Q6UX68 686 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 C17orf82Q86X59 251 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-225ENST00000586385 CAMK1DQ8IU85 385 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 UMODL1-AS1Q8N2C9 162 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 MSANTD4Q8NCY6 345 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 SEMA3CQ99985 751 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 LGR4Q9BXB1 951 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 FAM117AQ9C073 453 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 TMEM168Q9H0V1 697 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 SUV39H2Q9H5I1 410 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 LRRC19Q9H756 370 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 SAMSN1Q9NSI8 373 aaKnown RBP11.96□□□□□ -0.49
BRCA1-225ENST00000586385 ATP8A1Q9Y2Q0 1164 aa11.96□□□□□ -0.49
BRCA1-225ENST00000586385 HEMK1Q9Y5R4 338 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-225ENST00000586385 LRRK1Q38SD2 2015 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 CCP110O43303 1012 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 RECQL5O94762 991 aaPredicted RBP11.95□□□□□ -0.5
BRCA1-225ENST00000586385 TNFP01375 233 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 FUCA1P04066 466 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 CCL4P13236 92 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 PNLIPP16233 465 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 HTR1BP28222 390 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 YBEYP58557 167 aaPredicted RBP11.95□□□□□ -0.5
BRCA1-225ENST00000586385 C14orf28Q4W4Y0 310 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 COLEC12Q5KU26 742 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 ZNF574Q6ZN55 896 aaPredicted RBP11.95□□□□□ -0.5
BRCA1-225ENST00000586385 ATG14Q6ZNE5 492 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 SLFN11Q7Z7L1 901 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 ZNF677Q86XU0 584 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 NRROSQ86YC3 692 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 FAM46DQ8NEK8 389 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 OR6C4Q8NGE1 309 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 OR56A4Q8NGH8 313 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 PTCD2Q8WV60 388 aaKnown RBP11.95□□□□□ -0.5
BRCA1-225ENST00000586385 ECHDC3Q96DC8 303 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 RDH14Q9HBH5 336 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 LRIT1Q9P2V4 623 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 FZD10Q9ULW2 581 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 ST14Q9Y5Y6 855 aa11.95□□□□□ -0.5
BRCA1-225ENST00000586385 UNC13CQ8NB66 2214 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 A0A1W2PQC6 194 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 B4DGG1 531 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.94□□□□□ -0.5
BRCA1-225ENST00000586385 PRAMEF11O60813 436 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 KRT3P12035 628 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 GPD1P21695 349 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 TRIM23P36406 574 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 MAPK10P53779 464 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 MAZP56270 477 aaKnown RBP11.94□□□□□ -0.5
BRCA1-225ENST00000586385 PARP15Q460N3 678 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 MANEAQ5SRI9 462 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 SPECC1LQ69YQ0 1117 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 BRAT1Q6PJG6 821 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 LIPIQ6XZB0 460 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 ZNF438Q7Z4V0 828 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 TAF8Q7Z7C8 310 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 ZNF354CQ86Y25 554 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 DNAAF5Q86Y56 855 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 TSEN2Q8NCE0 465 aaKnown RBP11.94□□□□□ -0.5
BRCA1-225ENST00000586385 ZNF641Q96N77 438 aaPredicted RBP11.94□□□□□ -0.5
BRCA1-225ENST00000586385 NUDT22Q9BRQ3 303 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 SLC12A9Q9BXP2 914 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 SPATS2LQ9NUQ6 558 aaKnown RBP11.94□□□□□ -0.5
BRCA1-225ENST00000586385 TAB2Q9NYJ8 693 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 UBA2Q9UBT2 640 aaPredicted RBP11.94□□□□□ -0.5
BRCA1-225ENST00000586385 COL12A1Q99715 3063 aa11.94□□□□□ -0.5
BRCA1-225ENST00000586385 TRAFD1O14545 582 aaPredicted RBP11.93□□□□□ -0.5
BRCA1-225ENST00000586385 TNFRSF10CO14798 259 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 NUDT21O43809 227 aaKnown RBP11.93□□□□□ -0.5
BRCA1-225ENST00000586385 CREB3O43889 395 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 HOXC4P09017 264 aaPredicted RBP11.93□□□□□ -0.5
BRCA1-225ENST00000586385 XPAP23025 273 aaPredicted RBP11.93□□□□□ -0.5
BRCA1-225ENST00000586385 ERCC5P28715 1186 aaPredicted RBP11.93□□□□□ -0.5
BRCA1-225ENST00000586385 SOX5P35711 763 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 OR1D5P58170 312 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 RPL7AP62424 266 aaKnown RBP11.93□□□□□ -0.5
BRCA1-225ENST00000586385 OGDHQ02218 1023 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 TPD52L1Q16890 204 aaPredicted RBP11.93□□□□□ -0.5
BRCA1-225ENST00000586385 EFHC2Q5JST6 749 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 PPP1R15BQ5SWA1 713 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 PHF19Q5T6S3 580 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 AFMIDQ63HM1 303 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 ERAP2Q6P179 960 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 MON1BQ7L1V2 547 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 SRLQ86TD4 932 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 PHF13Q86YI8 300 aaPredicted RBP11.93□□□□□ -0.5
BRCA1-225ENST00000586385 FAM114A1Q8IWE2 563 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 C3orf20Q8ND61 904 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 RCBTB1Q8NDN9 531 aa11.93□□□□□ -0.5
BRCA1-225ENST00000586385 JPH3Q8WXH2 748 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms