RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 NCAPGQ9BPX3 1015 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 BPIFA3Q9BQP9 254 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 C1QTNF7Q9BXJ2 289 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 TRIM4Q9C037 500 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 TMEM168Q9H0V1 697 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 LRRC19Q9H756 370 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 FGF22Q9HCT0 170 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 SEPT11Q9NVA2 429 aaKnown RBP11.7□□□□□ -0.54
LIG3-207ENST00000586119 UBA2Q9UBT2 640 aaPredicted RBP11.7□□□□□ -0.54
LIG3-207ENST00000586119 KLQ9UEF7 1012 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 RNF215Q9Y6U7 377 aa11.7□□□□□ -0.54
LIG3-207ENST00000586119 PRAMEF33A0A0G2JMD5 474 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 TMEM110-MUSTN1A8MSY1 372 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 TOR1BO14657 336 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 PRAMEF10O60809 474 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 RECQL5O94762 991 aaPredicted RBP11.69□□□□□ -0.54
LIG3-207ENST00000586119 FUCA1P04066 466 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 ALPIP09923 528 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 EEF1GP26641 437 aaKnown RBP11.69□□□□□ -0.54
LIG3-207ENST00000586119 MMP12P39900 470 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 STAT1P42224 750 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 NSFP46459 744 aaKnown RBP11.69□□□□□ -0.54
LIG3-207ENST00000586119 PAPOLAP51003 745 aaKnown RBP11.69□□□□□ -0.54
LIG3-207ENST00000586119 BLKP51451 505 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 ZNF143P52747 638 aaPredicted RBP11.69□□□□□ -0.54
LIG3-207ENST00000586119 GSCP56915 257 aaPredicted RBP11.69□□□□□ -0.54
LIG3-207ENST00000586119 CYP4F2P78329 520 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 ZFP36L1Q07352 338 aaKnown RBP11.69□□□□□ -0.54
LIG3-207ENST00000586119 ELP6Q0PNE2 266 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 NFATC3Q12968 1075 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 PTPRRQ15256 657 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 EFHC2Q5JST6 749 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 PPP1R15BQ5SWA1 713 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 CDKAL1Q5VV42 579 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 OGFOD3Q6PK18 319 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 LVRNQ6Q4G3 990 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 MON1BQ7L1V2 547 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 TAF8Q7Z7C8 310 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 SRLQ86TD4 932 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 GKN2Q86XP6 184 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 CCNJLQ8IV13 435 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 UMODL1-AS1Q8N2C9 162 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 ARFGAP1Q8N6T3 406 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 C3orf20Q8ND61 904 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 FAM46DQ8NEK8 389 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 WDR48Q8TAF3 677 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 PTCD2Q8WV60 388 aaKnown RBP11.69□□□□□ -0.54
LIG3-207ENST00000586119 SCG3Q8WXD2 468 aaKnown RBP11.69□□□□□ -0.54
LIG3-207ENST00000586119 CASKIN2Q8WXE0 1202 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 EXTL1Q92935 676 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 WDR92Q96MX6 357 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 MCEEQ96PE7 176 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 RBM15Q96T37 977 aaKnown RBP eCLIP11.69□□□□□ -0.54
LIG3-207ENST00000586119 SEMA6CQ9H3T2 930 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 SUDS3Q9H7L9 328 aaPredicted RBP11.69□□□□□ -0.54
LIG3-207ENST00000586119 FANCLQ9NW38 375 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 TAS2R14Q9NYV8 317 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 FOXJ2Q9P0K8 574 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 ATP8A1Q9Y2Q0 1164 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 LOXL2Q9Y4K0 774 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 SDK2Q58EX2 2172 aa11.69□□□□□ -0.54
LIG3-207ENST00000586119 CAPN8A6NHC0 703 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 B4DGG1 531 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 TEX33O43247 280 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 B4GAT1O43505 415 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 PRAMEF11O60813 436 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 HTR1BP28222 390 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 MAPK10P53779 464 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 SYCP1Q15431 976 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 PARP15Q460N3 678 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 LIPIQ6XZB0 460 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 TRIM72Q6ZMU5 477 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 ARHGAP12Q8IWW6 846 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 JPH3Q8WXH2 748 aaPredicted RBP11.68□□□□□ -0.54
LIG3-207ENST00000586119 USP7Q93009 1102 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 PEBP4Q96S96 227 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 AGPAT1Q99943 283 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 CATSPERBQ9H7T0 1116 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 RDH14Q9HBH5 336 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 SPATS2LQ9NUQ6 558 aaKnown RBP11.68□□□□□ -0.54
LIG3-207ENST00000586119 LRIT1Q9P2V4 623 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 PCSK1NQ9UHG2 260 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 MOSPD1Q9UJG1 213 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 PCDHGA7Q9Y5G6 932 aa11.68□□□□□ -0.54
LIG3-207ENST00000586119 BSNQ9UPA5 3926 aa11.67□□□□□ -0.54
LIG3-207ENST00000586119 ZFC3H1O60293 1989 aaKnown RBP11.67□□□□□ -0.54
LIG3-207ENST00000586119 A0A0U1RQS6 177 aa11.67□□□□□ -0.54
LIG3-207ENST00000586119 SMTNL1A8MU46 457 aa11.67□□□□□ -0.54
LIG3-207ENST00000586119 TMCO5BA8MYB1 307 aa11.67□□□□□ -0.54
LIG3-207ENST00000586119 C9orf172C9J069 976 aa11.67□□□□□ -0.54
LIG3-207ENST00000586119 CALB1P05937 261 aa11.67□□□□□ -0.54
LIG3-207ENST00000586119 FAM87AP0C7U9 286 aa11.67□□□□□ -0.54
LIG3-207ENST00000586119 JMJD7P0C870 316 aa11.67□□□□□ -0.54
LIG3-207ENST00000586119 CCL4P13236 92 aa11.67□□□□□ -0.54
LIG3-207ENST00000586119 ITGB6P18564 788 aa11.67□□□□□ -0.54
LIG3-207ENST00000586119 CCKBRP32239 447 aa11.67□□□□□ -0.54
LIG3-207ENST00000586119 MLLT3P42568 568 aaPredicted RBP11.67□□□□□ -0.54
LIG3-207ENST00000586119 COPB1P53618 953 aaKnown RBP11.67□□□□□ -0.54
LIG3-207ENST00000586119 MAZP56270 477 aaKnown RBP11.67□□□□□ -0.54
LIG3-207ENST00000586119 OR1D5P58170 312 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms