RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 SATB1Q01826 763 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 POU6F1Q14863 301 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 CDKN3Q16667 212 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 KYNUQ16719 465 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 UGP2Q16851 508 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 UBAP2Q5T6F2 1119 aaKnown RBP16.21■□□□□ 0.19
SS18-226ENST00000585241 FAM46CQ5VWP2 391 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 UNC5AQ6ZN44 842 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 PARS2Q7L3T8 475 aaKnown RBP16.21■□□□□ 0.19
SS18-226ENST00000585241 NLRP9Q7RTR0 991 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 ANKMY2Q8IV38 441 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 NDUFAF2Q8N183 169 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 SIX5Q8N196 739 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 PPHLN1Q8NEY8 458 aaKnown RBP16.21■□□□□ 0.19
SS18-226ENST00000585241 FAM131CQ96AQ9 280 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 ARRDC3Q96B67 414 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 PPP1R16AQ96I34 528 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 TREX1Q9NSU2 369 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 SAMD15Q9P1V8 674 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 ZC3H7BQ9UGR2 993 aaKnown RBP16.21■□□□□ 0.19
SS18-226ENST00000585241 MAD1L1Q9Y6D9 718 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 ATG2BQ96BY7 2078 aa16.21■□□□□ 0.19
SS18-226ENST00000585241 C16orf96A6NNT2 1141 aa16.2■□□□□ 0.18
SS18-226ENST00000585241 RNASEH1O60930 286 aaKnown RBP16.2■□□□□ 0.18
SS18-226ENST00000585241 ADH1BP00325 375 aa16.2■□□□□ 0.18
SS18-226ENST00000585241 PRKCGP05129 697 aa16.2■□□□□ 0.18
SS18-226ENST00000585241 TIMP2P16035 220 aa16.2■□□□□ 0.18
SS18-226ENST00000585241 ZXDAP98168 799 aa16.2■□□□□ 0.18
SS18-226ENST00000585241 ACVR1Q04771 509 aa16.2■□□□□ 0.18
SS18-226ENST00000585241 TAF1AQ15573 450 aaPredicted RBP16.2■□□□□ 0.18
SS18-226ENST00000585241 TJAP1Q5JTD0 557 aa16.2■□□□□ 0.18
SS18-226ENST00000585241 HP1BP3Q5SSJ5 553 aaPredicted RBP16.2■□□□□ 0.18
SS18-226ENST00000585241 CFAP58Q5T655 872 aa16.2■□□□□ 0.18
SS18-226ENST00000585241 ZNF776Q68DI1 518 aaPredicted RBP16.2■□□□□ 0.18
SS18-226ENST00000585241 ZNF449Q6P9G9 518 aa16.2■□□□□ 0.18
SS18-226ENST00000585241 USP45Q70EL2 814 aa16.2■□□□□ 0.18
SS18-226ENST00000585241 CYS1Q717R9 158 aa16.2■□□□□ 0.18
SS18-226ENST00000585241 MMAAQ8IVH4 418 aaKnown RBP16.2■□□□□ 0.18
SS18-226ENST00000585241 TTC30BQ8N4P2 665 aa16.2■□□□□ 0.18
SS18-226ENST00000585241 MDGA1Q8NFP4 955 aa16.2■□□□□ 0.18
SS18-226ENST00000585241 CLDN23Q96B33 292 aa16.2■□□□□ 0.18
SS18-226ENST00000585241 SMIM14Q96QK8 99 aa16.2■□□□□ 0.18
SS18-226ENST00000585241 HDAC8Q9BY41 377 aa16.2■□□□□ 0.18
SS18-226ENST00000585241 TBC1D17Q9HA65 648 aa16.2■□□□□ 0.18
SS18-226ENST00000585241 LMAN1LQ9HAT1 526 aa16.2■□□□□ 0.18
SS18-226ENST00000585241 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.2■□□□□ 0.182e-6■■□□□ 12
SS18-226ENST00000585241 ZNF711Q9Y462 761 aa16.2■□□□□ 0.18
SS18-226ENST00000585241 ZCWPW2A0A1B0GU75 182 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 KPNA3O00505 521 aaPredicted RBP16.19■□□□□ 0.18
SS18-226ENST00000585241 ALDH1A2O94788 518 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 CRTAMO95727 393 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 IL1BP01584 269 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 POLBP06746 335 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 ALPIP09923 528 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 NUDT17P0C025 328 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 C5AR1P21730 350 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 NFKBIAP25963 317 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 HNF1BP35680 557 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 ZNF140P52738 457 aaPredicted RBP16.19■□□□□ 0.18
SS18-226ENST00000585241 METAP1P53582 386 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 RPS14P62263 151 aaKnown RBP16.19■□□□□ 0.18
SS18-226ENST00000585241 CRYMQ14894 314 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 CST6Q15828 149 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 ANKRD20A4Q4UJ75 823 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 SPANXN3Q5MJ09 141 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 TSTD2Q5T7W7 516 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 CASC4Q6P4E1 433 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 Q6ZS52 159 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 PALM2Q8IXS6 379 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 GSDMBQ8TAX9 411 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 BLOC1S5Q8TDH9 187 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 TRIM56Q9BRZ2 755 aaKnown RBP16.19■□□□□ 0.18
SS18-226ENST00000585241 FOXQ1Q9C009 403 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 MKRN2Q9H000 416 aaKnown RBP16.19■□□□□ 0.18
SS18-226ENST00000585241 CHRAC1Q9NRG0 131 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 MTF2Q9Y483 593 aaPredicted RBP16.19■□□□□ 0.18
SS18-226ENST00000585241 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.19■□□□□ 0.18
SS18-226ENST00000585241 FAM169AQ9Y6X4 670 aa16.19■□□□□ 0.18
SS18-226ENST00000585241 NPIPB15A6NHN6 443 aaPredicted RBP16.18■□□□□ 0.18
SS18-226ENST00000585241 FAM170BA6NMN3 283 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 AURKAO14965 403 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 AREL1O15033 823 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 SPINT1O43278 529 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 ACSL3O95573 720 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 C1QAP02745 245 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 PIRTP0C851 137 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 CYP2A6P11509 494 aaPredicted RBP16.18■□□□□ 0.18
SS18-226ENST00000585241 CTPS1P17812 591 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 NMBRP28336 390 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 SSTR1P30872 391 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 DRD3P35462 400 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 HMGCLP35914 325 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 ABL2P42684 1182 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 PSMD8P48556 350 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 NEK3P51956 506 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 PDE1BQ01064 536 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 ZBTB16Q05516 673 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 GAS6Q14393 721 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 CASP8Q14790 479 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 UBXN2BQ14CS0 331 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms