RNA–Protein interactions for RNA: ENST00000584340.1

PSMD11-210, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 4

Gene PSMD11, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-210	ENST00000584340	SFSWAP	Q12872	951 aa	Known RBP	10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	ELF2	Q15723	593 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	CNGA3	Q16281	694 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	TPRG1L	Q5T0D9	272 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	SEL1L2	Q5TEA6	688 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	TCEAL6	Q6IPX3	200 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	DARS2	Q6PI48	645 aa	Known RBP	10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	CRTC1	Q6UUV9	634 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	RFLNA	Q6ZTI6	216 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	PID1	Q7Z2X4	250 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	TECPR1	Q7Z6L1	1165 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	CDKL3	Q8IVW4	592 aa	Predicted RBP	10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	C12orf50	Q8NA57	414 aa	Predicted RBP	10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	TP53I13	Q8NBR0	393 aa	Predicted RBP	10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	GANC	Q8TET4	914 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	NSMCE1	Q8WV22	266 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	RUBCN	Q92622	972 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	KLK6	Q92876	244 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	TCEAL3	Q969E4	200 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	COQ10A	Q96MF6	247 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	PCDH9	Q9HC56	1237 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	TM9SF3	Q9HD45	589 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	UBP1	Q9NZI7	540 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	PNMA8B	Q9ULN7	279 aa	Predicted RBP	10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	PHTF1	Q9UMS5	762 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	CA5B	Q9Y2D0	317 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	ZKSCAN5	Q9Y2L8	839 aa		10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	ATXN2	Q99700	1313 aa	Known RBP	10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	ASCC3	Q8N3C0	2202 aa	Known RBP	10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	ARID1B	Q8NFD5	2236 aa	Predicted RBP	10.8	□□□□□ -0.68
PSMD11-210	ENST00000584340	POM121B	A6NF01	834 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	FAM47DP	A6NHR8	397 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340		H0Y8X5	98 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	CDX4	O14627	284 aa	Predicted RBP	10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	GFRA3	O60609	400 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	HEXIM1	O94992	359 aa	Known RBP	10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	PAK4	O96013	591 aa	Predicted RBP	10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	EPO	P01588	193 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	ALPI	P09923	528 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	ZSCAN5DP	P0CG00	497 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	PSMB4	P28070	264 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	MAT2A	P31153	395 aa	Known RBP	10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	STIP1	P31948	543 aa	Known RBP	10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	LIG3	P49916	1009 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	WNT3A	P56704	352 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	RPL26	P61254	145 aa	Known RBP	10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	RPS21	P63220	83 aa	Known RBP	10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	CDK18	Q07002	472 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	ITK	Q08881	620 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	SPEM2	Q0P670	501 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	SNX1	Q13596	522 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	SF3A2	Q15428	464 aa	Known RBP	10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	CSRP2	Q16527	193 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	ARMC12	Q5T9G4	340 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	KIAA1161	Q6NSJ0	714 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	LAYN	Q6UX15	382 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	GCNT7	Q6ZNI0	430 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	ABI3BP	Q7Z7G0	1075 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	SPATS2	Q86XZ4	545 aa	Known RBP	10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	BBS5	Q8N3I7	341 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	PIGK	Q92643	395 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	FEM1C	Q96JP0	617 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	SLC6A18	Q96N87	628 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	SLC17A9	Q9BYT1	436 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	ARNT2	Q9HBZ2	717 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	FSCN3	Q9NQT6	498 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	MBNL1	Q9NR56	388 aa	Known RBP	10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	SEMA4G	Q9NTN9	838 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	RPL26L1	Q9UNX3	145 aa	Known RBP	10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	COQ6	Q9Y2Z9	468 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	SPO11	Q9Y5K1	396 aa		10.79	□□□□□ -0.68
PSMD11-210	ENST00000584340	LRP4	O75096	1905 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340		A0A1W2PQ67	120 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	LNP1	A1A4G5	178 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340		A8MX80	341 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340		F5H423	210 aa	Predicted RBP	10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	TM4SF5	O14894	197 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	AURKA	O14965	403 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	BCAT2	O15382	392 aa	Predicted RBP	10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	OPHN1	O60890	802 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	PCDH8	O95206	1070 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	SOD1	P00441	154 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	CP	P00450	1065 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	AGT	P01019	485 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	C6	P13671	934 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	CTPS1	P17812	591 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	RPL22	P35268	128 aa	Known RBP	10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	CHRNA4	P43681	627 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	CSNK1E	P49674	416 aa	Known RBP	10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	POLR2L	P62875	67 aa	Known RBP	10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	RACK1	P63244	317 aa	Known RBP	10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	CCDC15	Q0P6D6	951 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	SHB	Q15464	509 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	LONRF2	Q1L5Z9	754 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	WSCD2	Q2TBF2	565 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	P3H1	Q32P28	736 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	WDR45B	Q5MNZ6	344 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	CYP2U1	Q7Z449	544 aa		10.78	□□□□□ -0.68
PSMD11-210	ENST00000584340	HSD11B1L	Q7Z5J1	315 aa		10.78	□□□□□ -0.68

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