RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 TMEM30AQ9NV96 361 aa6.27□□□□□ -1.41
PRKCA-205ENST00000583775 DNAJC17Q9NVM6 304 aaKnown RBP6.27□□□□□ -1.41
PRKCA-205ENST00000583775 GPATCH2LQ9NWQ4 482 aa6.27□□□□□ -1.41
PRKCA-205ENST00000583775 IL37Q9NZH6 218 aa6.27□□□□□ -1.41
PRKCA-205ENST00000583775 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.27□□□□□ -1.41
PRKCA-205ENST00000583775 KLHL14Q9P2G3 628 aa6.27□□□□□ -1.41
PRKCA-205ENST00000583775 CTNNAL1Q9UBT7 734 aa6.27□□□□□ -1.41
PRKCA-205ENST00000583775 TRHDEQ9UKU6 1024 aa6.27□□□□□ -1.41
PRKCA-205ENST00000583775 HEY1Q9Y5J3 304 aa6.27□□□□□ -1.41
PRKCA-205ENST00000583775 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.27□□□□□ -1.41
PRKCA-205ENST00000583775 MYO16Q9Y6X6 1858 aa6.27□□□□□ -1.41
PRKCA-205ENST00000583775 TANC1Q9C0D5 1861 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 SHROOM3Q8TF72 1996 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 CCDC163A0A0D9SF12 145 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 IQANK1A0A1B0GTG1 560 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 GOLGA6L7A0A1B0GV03 622 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 TCRBV9S1A1TA0A576 114 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 FAM92AA1XBS5 289 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 AP3B1O00203 1094 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 SYN3O14994 580 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 CACNG3O60359 315 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 DNAJC8O75937 253 aaPredicted RBP6.26□□□□□ -1.41
PRKCA-205ENST00000583775 KIAA0754O94854 1291 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 SUN1O94901 812 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 METTL18O95568 372 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 IL1BP01584 269 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 MPOP05164 745 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 GSTA1P08263 222 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 DHRS4L1P0CG22 281 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 GLI4P10075 376 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 CREB1P16220 341 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 IGFBP6P24592 240 aaPredicted RBP6.26□□□□□ -1.41
PRKCA-205ENST00000583775 GRK2P25098 689 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 SSTR1P30872 391 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 GRK3P35626 688 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 MSH2P43246 934 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 CDK7P50613 346 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 ATXN1P54253 815 aaKnown RBP6.26□□□□□ -1.41
PRKCA-205ENST00000583775 CACNA2D1P54289 1103 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 TSPY1Q01534 308 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 GAD2Q05329 585 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 PPIDQ08752 370 aaKnown RBP6.26□□□□□ -1.41
PRKCA-205ENST00000583775 GALNT2Q10471 571 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 WASHC5Q12768 1159 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 SMARCB1Q12824 385 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 MTA1Q13330 715 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 SPARCL1Q14515 664 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 PKN2Q16513 984 aaKnown RBP6.26□□□□□ -1.41
PRKCA-205ENST00000583775 NFE2Q16621 373 aaPredicted RBP6.26□□□□□ -1.41
PRKCA-205ENST00000583775 PDK4Q16654 411 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 DEFB115Q30KQ5 88 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 NOMO2Q5JPE7 1267 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 SPDYAQ5MJ70 313 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 ANKRD20A2Q5SQ80 823 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 STXBP5Q5T5C0 1151 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 LGSNQ5TDP6 509 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 ANKRD20A1Q5TYW2 823 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 ANKRD20A3Q5VUR7 823 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 BSPRYQ5W0U4 402 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 NUGGCQ68CJ6 796 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 MSANTD2Q6P1R3 559 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 LRRC8BQ6P9F7 803 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 ABHD17CQ6PCB6 329 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 RSPO2Q6UXX9 243 aaPredicted RBP6.26□□□□□ -1.41
PRKCA-205ENST00000583775 RPTNQ6XPR3 784 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 TIFABQ6ZNK6 161 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 ZNF534Q76KX8 674 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 RTN4RL1Q86UN2 441 aaPredicted RBP6.26□□□□□ -1.41
PRKCA-205ENST00000583775 SLC26A11Q86WA9 606 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 LRRC6Q86X45 466 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 FAM131BQ86XD5 332 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 LRRC49Q8IUZ0 686 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 IGDCC3Q8IVU1 814 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 SRRM1Q8IYB3 904 aaKnown RBP6.26□□□□□ -1.41
PRKCA-205ENST00000583775 COLGALT2Q8IYK4 626 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 LRRC34Q8IZ02 419 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 OTUD6BQ8N6M0 293 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 GBP7Q8N8V2 638 aaPredicted RBP6.26□□□□□ -1.41
PRKCA-205ENST00000583775 BANPQ8N9N5 519 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 CCDC197Q8NCU1 140 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 PIP4K2CQ8TBX8 421 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 ZNF398Q8TD17 642 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 PPM1EQ8WY54 764 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 CCT6BQ92526 530 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 MYLPFQ96A32 169 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 TTC17Q96AE7 1141 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 HDAC11Q96DB2 347 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 MTBPQ96DY7 904 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 CABS1Q96KC9 395 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 C8orf48Q96LL4 319 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 PPP1R2P1Q96PQ5 205 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 SMC6Q96SB8 1091 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 KCNK16Q96T55 309 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 PAFAH2Q99487 392 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 EBNA1BP2Q99848 306 aaKnown RBP6.26□□□□□ -1.41
PRKCA-205ENST00000583775 PRMT1Q99873 361 aaKnown RBP6.26□□□□□ -1.41
PRKCA-205ENST00000583775 PAAF1Q9BRP4 392 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.26□□□□□ -1.41
PRKCA-205ENST00000583775 ZCWPW1Q9H0M4 648 aa6.26□□□□□ -1.41
PRKCA-205ENST00000583775 VPS11Q9H270 941 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms