RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 TPD52L1Q16890 204 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-215ENST00000583328 EXOC3L4Q17RC7 722 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 ERAP2Q6P179 960 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 NLRP14Q86W24 1093 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 XYLT1Q86Y38 959 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 CACNA2D3Q8IZS8 1091 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 RCBTB1Q8NDN9 531 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 OR56A4Q8NGH8 313 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 C9orf43Q8TAL5 461 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-215ENST00000583328 ENOX1Q8TC92 643 aaKnown RBP12.38□□□□□ -0.43
TOP3A-215ENST00000583328 KIAA1524Q8TCG1 905 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 PSMG3-AS1Q96PY0 264 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 NAT10Q9H0A0 1025 aaKnown RBP12.38□□□□□ -0.43
TOP3A-215ENST00000583328 TMEM168Q9H0V1 697 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 LRRC4CQ9HCJ2 640 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 PCDH12Q9NPG4 1184 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 MRPL40Q9NQ50 206 aaKnown RBP12.38□□□□□ -0.43
TOP3A-215ENST00000583328 DNAJC12Q9UKB3 198 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 MFHAS1Q9Y4C4 1052 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 DAAM1Q9Y4D1 1078 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 PCDHGA3Q9Y5H0 932 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 NOTCH2Q04721 2471 aa12.38□□□□□ -0.43
TOP3A-215ENST00000583328 LRRK2Q5S007 2527 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 TMEM202A6NGA9 273 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 INSIG1O15503 277 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 PIGNO95427 931 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 PNMA6AP0CW24 399 aaPredicted RBP12.37□□□□□ -0.43
TOP3A-215ENST00000583328 FGF3P11487 239 aaPredicted RBP12.37□□□□□ -0.43
TOP3A-215ENST00000583328 KELP23276 732 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 ADRA1BP35368 520 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 UGT1A3P35503 534 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 LIG3P49916 1009 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 MAZP56270 477 aaKnown RBP12.37□□□□□ -0.43
TOP3A-215ENST00000583328 KIAA1024LP59773 190 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 BPIFB4P59827 614 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 NRG1Q02297 640 aaPredicted RBP12.37□□□□□ -0.43
TOP3A-215ENST00000583328 BIRC2Q13490 618 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 UGP2Q16851 508 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 ANO6Q4KMQ2 910 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 C2CD6Q53TS8 623 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 CFAP58Q5T655 872 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 MANEALQ5VSG8 457 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 TRNP1Q6NT89 227 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 BNIPLQ7Z465 357 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 FAM114A1Q8IWE2 563 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 PLA2G15Q8NCC3 412 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 CCDC112Q8NEF3 446 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 CCL4L1Q8NHW4 92 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 HCAR2Q8TDS4 363 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 CASKIN2Q8WXE0 1202 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 TBC1D31Q96DN5 1066 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 NUDT22Q9BRQ3 303 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 SUV39H2Q9H5I1 410 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 CYP4F12Q9HCS2 524 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 FGF22Q9HCT0 170 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 TMEM59LQ9UK28 342 aa12.37□□□□□ -0.43
TOP3A-215ENST00000583328 SPTAN1Q13813 2472 aaKnown RBP12.36□□□□□ -0.43
TOP3A-215ENST00000583328 IGHV5-10-1A0A0J9YXX1 117 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 TNFRSF10CO14798 259 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 CAPN5O15484 640 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-215ENST00000583328 NKX2-8O15522 239 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 RAD1O60671 282 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 LRIG2O94898 1065 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 PRKCGP05129 697 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 PON1P27169 355 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 CDH5P33151 784 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-215ENST00000583328 CSTF2P33240 577 aaKnown RBP eCLIP12.36□□□□□ -0.43
TOP3A-215ENST00000583328 ARSDP51689 593 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 MYL5Q02045 173 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 AGERQ15109 404 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 CLPPQ16740 277 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-215ENST00000583328 CDO1Q16878 200 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 INO80DQ53TQ3 878 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-215ENST00000583328 SMYD5Q6GMV2 418 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 MSANTD4Q8NCY6 345 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 AGBL5Q8NDL9 886 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 ART4Q93070 314 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 PMEPA1Q969W9 287 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 FUBP1Q96AE4 644 aaKnown RBP12.36□□□□□ -0.43
TOP3A-215ENST00000583328 CCDC74BQ96LY2 380 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 BPIFA3Q9BQP9 254 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 MAGEB5Q9BZ81 275 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 SLC39A1Q9NY26 324 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 AJAP1Q9UKB5 411 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-215ENST00000583328 PLAAQ9Y263 795 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 B3GALT1Q9Y5Z6 326 aa12.36□□□□□ -0.43
TOP3A-215ENST00000583328 FAM72CH0Y354 149 aa12.35□□□□□ -0.43
TOP3A-215ENST00000583328 RECQL5O94762 991 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-215ENST00000583328 PLEKP08567 350 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-215ENST00000583328 PRKAR1AP10644 381 aa12.35□□□□□ -0.43
TOP3A-215ENST00000583328 CD1CP29017 333 aa12.35□□□□□ -0.43
TOP3A-215ENST00000583328 TRA2AQ13595 282 aaKnown RBP eCLIP12.35□□□□□ -0.43
TOP3A-215ENST00000583328 GRM3Q14832 879 aa12.35□□□□□ -0.43
TOP3A-215ENST00000583328 CYTH1Q15438 398 aa12.35□□□□□ -0.43
TOP3A-215ENST00000583328 RAB6CQ53S08 254 aa12.35□□□□□ -0.43
TOP3A-215ENST00000583328 FAM72AQ5TYM5 149 aa12.35□□□□□ -0.43
TOP3A-215ENST00000583328 TAF3Q5VWG9 929 aa12.35□□□□□ -0.43
TOP3A-215ENST00000583328 FAM72DQ6L9T8 149 aa12.35□□□□□ -0.43
TOP3A-215ENST00000583328 FAM72BQ86X60 149 aa12.35□□□□□ -0.43
TOP3A-215ENST00000583328 DNAAF5Q86Y56 855 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms