RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 COL25A1Q9BXS0 654 aaPredicted RBP9.58□□□□□ -0.88
RFFL-210ENST00000582308 FAM129AQ9BZQ8 928 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 XAB2Q9HCS7 855 aaKnown RBP9.58□□□□□ -0.88
RFFL-210ENST00000582308 PCDH12Q9NPG4 1184 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 CD93Q9NPY3 652 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 DYRK4Q9NR20 520 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 FBXL12Q9NXK8 326 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 EBF1Q9UH73 591 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 NFU1Q9UMS0 254 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 SPO11Q9Y5K1 396 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 SDK1Q7Z5N4 2213 aa9.58□□□□□ -0.88
RFFL-210ENST00000582308 PLXNA2O75051 1894 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 ZNF106Q9H2Y7 1883 aaKnown RBP9.57□□□□□ -0.88
RFFL-210ENST00000582308 THADAQ6YHU6 1953 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 BPTFQ12830 3046 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 NPIPB15A6NHN6 443 aaPredicted RBP9.57□□□□□ -0.88
RFFL-210ENST00000582308 A8MX80 341 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 K7ESF4 209 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 TNFRSF10AO00220 468 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 AURKAO14965 403 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 AREL1O15033 823 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 CTIFO43310 598 aaKnown RBP9.57□□□□□ -0.88
RFFL-210ENST00000582308 PPFIA2O75334 1257 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 RNASEH2AO75792 299 aaKnown RBP9.57□□□□□ -0.88
RFFL-210ENST00000582308 ALDH1A2O94788 518 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 PAPSS2O95340 614 aaPredicted RBP9.57□□□□□ -0.88
RFFL-210ENST00000582308 APBB3O95704 486 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 DNTTP04053 509 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 FAM153BP0C7A2 387 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 MYBL2P10244 700 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 ADRB3P13945 408 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 MGAT1P26572 445 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 TNFRSF8P28908 595 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 GRIA4P48058 902 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 NPY2RP49146 381 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 TPMTP51580 245 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 CCR3P51677 355 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 NEK3P51956 506 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 ARL4CP56559 192 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 VSNL1P62760 191 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 CRADDP78560 199 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 CDH17Q12864 832 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 POU6F1Q14863 301 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 ELF2Q15723 593 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 HIF1AQ16665 826 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 CDKN3Q16667 212 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 FAM153CQ494X1 144 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 FBXL19Q6PCT2 694 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 CCNI2Q6ZMN8 369 aaPredicted RBP9.57□□□□□ -0.88
RFFL-210ENST00000582308 USP30Q70CQ3 517 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 USP45Q70EL2 814 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 TSPAN33Q86UF1 283 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 RASSF3Q86WH2 238 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 IGDCC3Q8IVU1 814 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 PGBD3Q8N328 593 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 TTC30BQ8N4P2 665 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 FBXL6Q8N531 539 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 CAMKK1Q8N5S9 505 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 EIF1ADQ8N9N8 165 aaKnown RBP9.57□□□□□ -0.88
RFFL-210ENST00000582308 MDGA1Q8NFP4 955 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 GANCQ8TET4 914 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 RUBCNQ92622 972 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 SIGLEC10Q96LC7 697 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 LYSMD1Q96S90 227 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 OMDQ99983 421 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 PARD6BQ9BYG5 372 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 FRMD8Q9BZ67 464 aaPredicted RBP9.57□□□□□ -0.88
RFFL-210ENST00000582308 MAGEE1Q9HCI5 957 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 ITM2CQ9NQX7 267 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 SPATA6Q9NWH7 488 aaPredicted RBP9.57□□□□□ -0.88
RFFL-210ENST00000582308 BCCIPQ9P287 314 aaKnown RBP eCLIP9.57□□□□□ -0.88
RFFL-210ENST00000582308 B4GALT6Q9UBX8 382 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 GGT7Q9UJ14 662 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 SCML1Q9UN30 329 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 ITM2BQ9Y287 266 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 ZNF318Q5VUA4 2279 aa9.57□□□□□ -0.88
RFFL-210ENST00000582308 PLXNB3Q9ULL4 1909 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 CAPN8A6NHC0 703 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 SDR42E2A6NKP2 422 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 E7ESA3 106 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 AP3B1O00203 1094 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 IGLV3-19P01714 112 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 LHCGRP22888 699 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 XPAP23025 273 aaPredicted RBP9.56□□□□□ -0.88
RFFL-210ENST00000582308 VIPR1P32241 457 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 MMP12P39900 470 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 PXNP49023 591 aaPredicted RBP9.56□□□□□ -0.88
RFFL-210ENST00000582308 SUOXP51687 545 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 FAM193AP78312 1265 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 DHX9Q08211 1270 aaKnown RBP9.56□□□□□ -0.88
RFFL-210ENST00000582308 RALGDSQ12967 914 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 FASTKD3Q14CZ7 662 aaKnown RBP9.56□□□□□ -0.88
RFFL-210ENST00000582308 BBS9Q3SYG4 887 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 TTC31Q49AM3 519 aaPredicted RBP9.56□□□□□ -0.88
RFFL-210ENST00000582308 CCDC38Q502W7 563 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 TMEM31Q5JXX7 168 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 HP1BP3Q5SSJ5 553 aaPredicted RBP9.56□□□□□ -0.88
RFFL-210ENST00000582308 WDR93Q6P2C0 686 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 CRTC1Q6UUV9 634 aa9.56□□□□□ -0.88
RFFL-210ENST00000582308 DPPA4Q7L190 304 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms