RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 CXorf57Q6NSI4 855 aaKnown RBP22.76■■□□□ 1.23
CCDC47-204ENST00000582252 MRNIPQ6NTE8 343 aa22.76■■□□□ 1.23
CCDC47-204ENST00000582252 PTAR1Q7Z6K3 402 aaPredicted RBP22.76■■□□□ 1.23
CCDC47-204ENST00000582252 ELMOD1Q8N336 334 aa22.76■■□□□ 1.23
CCDC47-204ENST00000582252 KIF2BQ8N4N8 673 aa22.76■■□□□ 1.23
CCDC47-204ENST00000582252 KCTD4Q8WVF5 259 aa22.76■■□□□ 1.23
CCDC47-204ENST00000582252 ZFRQ96KR1 1074 aaKnown RBP22.76■■□□□ 1.23
CCDC47-204ENST00000582252 TRIB3Q96RU7 358 aa22.76■■□□□ 1.23
CCDC47-204ENST00000582252 CERS4Q9HA82 394 aa22.76■■□□□ 1.23
CCDC47-204ENST00000582252 NOD2Q9HC29 1040 aa22.76■■□□□ 1.23
CCDC47-204ENST00000582252 DNAJC28Q9NX36 388 aa22.76■■□□□ 1.23
CCDC47-204ENST00000582252 GLP2RO95838 553 aa22.75■■□□□ 1.23
CCDC47-204ENST00000582252 CR2P20023 1033 aa22.75■■□□□ 1.23
CCDC47-204ENST00000582252 GMPRP36959 345 aa22.75■■□□□ 1.23
CCDC47-204ENST00000582252 SCNN1BP51168 640 aa22.75■■□□□ 1.23
CCDC47-204ENST00000582252 TAS2R39P59534 338 aa22.75■■□□□ 1.23
CCDC47-204ENST00000582252 KLC3Q6P597 504 aa22.75■■□□□ 1.23
CCDC47-204ENST00000582252 CNSTQ6PJW8 725 aa22.75■■□□□ 1.23
CCDC47-204ENST00000582252 CENPLQ8N0S6 344 aaPredicted RBP22.75■■□□□ 1.23
CCDC47-204ENST00000582252 GCNAQ96QF7 691 aa22.75■■□□□ 1.23
CCDC47-204ENST00000582252 SORT1Q99523 831 aa22.75■■□□□ 1.23
CCDC47-204ENST00000582252 IL21Q9HBE4 155 aa22.75■■□□□ 1.23
CCDC47-204ENST00000582252 SNUPNO95149 360 aaKnown RBP22.74■■□□□ 1.23
CCDC47-204ENST00000582252 LUC7L3O95232 432 aaKnown RBP22.74■■□□□ 1.23
CCDC47-204ENST00000582252 SERPINA6P08185 405 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 KRT16P08779 473 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 MYL4P12829 197 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 RGS19P49795 217 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 CYTH1Q15438 398 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 FAM83EQ2M2I3 478 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 INO80DQ53TQ3 878 aaPredicted RBP22.74■■□□□ 1.23
CCDC47-204ENST00000582252 AGAP9Q5VTM2 703 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 FAM45BPQ6NSW5 357 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 CEP97Q8IW35 865 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 CARNMT1Q8N4J0 409 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 ARL14EPQ8N8R7 260 aaPredicted RBP22.74■■□□□ 1.23
CCDC47-204ENST00000582252 GPR150Q8NGU9 434 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 FAM45AQ8TCE6 357 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 TMA16Q96EY4 203 aaKnown RBP22.74■■□□□ 1.23
CCDC47-204ENST00000582252 OMDQ99983 421 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 MRPL46Q9H2W6 279 aaKnown RBP22.74■■□□□ 1.23
CCDC47-204ENST00000582252 TRIM33Q9UPN9 1127 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 APOBEC2Q9Y235 224 aaKnown RBP22.74■■□□□ 1.23
CCDC47-204ENST00000582252 CPQQ9Y646 472 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 ALOX15P16050 662 aaPredicted RBP22.74■■□□□ 1.23
CCDC47-204ENST00000582252 PFKLP17858 780 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 OGNP20774 298 aaKnown RBP22.74■■□□□ 1.23
CCDC47-204ENST00000582252 GLDCP23378 1020 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 GABRR2P28476 465 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 RALGPS1Q5JS13 557 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 Q6ZNB5 142 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 SDCCAG8Q86SQ7 713 aaPredicted RBP22.74■■□□□ 1.23
CCDC47-204ENST00000582252 ALYREFQ86V81 257 aaKnown RBP22.74■■□□□ 1.23
CCDC47-204ENST00000582252 FSTL5Q8N475 847 aaPredicted RBP22.74■■□□□ 1.23
CCDC47-204ENST00000582252 WBP2Q969T9 261 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 SLC7A6OSQ96CW6 309 aaPredicted RBP22.74■■□□□ 1.23
CCDC47-204ENST00000582252 RMDN1Q96DB5 314 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 MRPL57Q9BQC6 102 aaKnown RBP22.74■■□□□ 1.23
CCDC47-204ENST00000582252 ADGRE3Q9BY15 652 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 NMUR2Q9GZQ4 415 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 CPSF2Q9P2I0 782 aaKnown RBP22.74■■□□□ 1.23
CCDC47-204ENST00000582252 DPP7Q9UHL4 492 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 STK38LQ9Y2H1 464 aa22.74■■□□□ 1.23
CCDC47-204ENST00000582252 DOCK6Q96HP0 2047 aa22.73■■□□□ 1.23
CCDC47-204ENST00000582252 TK2O00142 265 aa22.73■■□□□ 1.23
CCDC47-204ENST00000582252 CLASP2O75122 1294 aaKnown RBP22.73■■□□□ 1.23
CCDC47-204ENST00000582252 GJB3O75712 270 aa22.73■■□□□ 1.23
CCDC47-204ENST00000582252 ESRRAP11474 423 aaPredicted RBP22.73■■□□□ 1.23
CCDC47-204ENST00000582252 CDC25CP30307 473 aa22.73■■□□□ 1.23
CCDC47-204ENST00000582252 CFAP157Q5JU67 520 aa22.73■■□□□ 1.23
CCDC47-204ENST00000582252 MFSD6LQ8IWD5 586 aa22.73■■□□□ 1.23
CCDC47-204ENST00000582252 FAM217AQ8IXS0 508 aa22.73■■□□□ 1.23
CCDC47-204ENST00000582252 TIFAQ96CG3 184 aa22.73■■□□□ 1.23
CCDC47-204ENST00000582252 PTCD3Q96EY7 689 aaKnown RBP22.73■■□□□ 1.23
CCDC47-204ENST00000582252 TDRD1Q9BXT4 1180 aaKnown RBP22.73■■□□□ 1.23
CCDC47-204ENST00000582252 C2orf81A6NN90 581 aa22.72■■□□□ 1.23
CCDC47-204ENST00000582252 SLC26A3P40879 764 aa22.72■■□□□ 1.23
CCDC47-204ENST00000582252 ARSDP51689 593 aa22.72■■□□□ 1.23
CCDC47-204ENST00000582252 CDH18Q13634 790 aa22.72■■□□□ 1.23
CCDC47-204ENST00000582252 TAF1AQ15573 450 aaPredicted RBP22.72■■□□□ 1.23
CCDC47-204ENST00000582252 PPM1LQ5SGD2 360 aa22.72■■□□□ 1.23
CCDC47-204ENST00000582252 HECTD2Q5U5R9 776 aa22.72■■□□□ 1.23
CCDC47-204ENST00000582252 TXNDC8Q6A555 127 aa22.72■■□□□ 1.23
CCDC47-204ENST00000582252 NXNL1Q96CM4 212 aa22.72■■□□□ 1.23
CCDC47-204ENST00000582252 CCDC126Q96EE4 140 aa22.72■■□□□ 1.23
CCDC47-204ENST00000582252 DNAJC1Q96KC8 554 aaKnown RBP22.72■■□□□ 1.23
CCDC47-204ENST00000582252 TBATAQ96M53 351 aa22.72■■□□□ 1.23
CCDC47-204ENST00000582252 CYP2S1Q96SQ9 504 aa22.72■■□□□ 1.23
CCDC47-204ENST00000582252 GATA5Q9BWX5 397 aaPredicted RBP22.72■■□□□ 1.23
CCDC47-204ENST00000582252 ILKAPQ9H0C8 392 aaPredicted RBP22.72■■□□□ 1.23
CCDC47-204ENST00000582252 MAN1C1Q9NR34 630 aa22.72■■□□□ 1.23
CCDC47-204ENST00000582252 CATSPERZQ9NTU4 200 aa22.72■■□□□ 1.23
CCDC47-204ENST00000582252 ARL8BQ9NVJ2 186 aa22.72■■□□□ 1.23
CCDC47-204ENST00000582252 XPR1Q9UBH6 696 aa22.72■■□□□ 1.23
CCDC47-204ENST00000582252 VPS28Q9UK41 221 aa22.72■■□□□ 1.23
CCDC47-204ENST00000582252 VWA7Q9Y334 891 aa22.72■■□□□ 1.23
CCDC47-204ENST00000582252 SH3BP1Q9Y3L3 701 aa22.72■■□□□ 1.23
CCDC47-204ENST00000582252 ARL5AQ9Y689 179 aa22.72■■□□□ 1.23
CCDC47-204ENST00000582252 CD3EAPO15446 510 aaKnown RBP22.71■■□□□ 1.23
CCDC47-204ENST00000582252 TMCC1O94876 653 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms