RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	CLEC17A	Q6ZS10	378 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	RFX8	Q6ZV50	586 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	IRF2BP2	Q7Z5L9	587 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	GKN2	Q86XP6	184 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	ARHGAP12	Q8IWW6	846 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	OR1E3	Q8WZA6	343 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	NSMCE3	Q96MG7	304 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	WDR92	Q96MX6	357 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	ZNF641	Q96N77	438 aa	Predicted RBP	11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	GFM1	Q96RP9	751 aa	Known RBP	11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	DPH1	Q9BZG8	443 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	PARVA	Q9NVD7	372 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	MOSPD1	Q9UJG1	213 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	PCDHGA8	Q9Y5G5	932 aa		11.7	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	CCDC187	A0A096LP49	1063 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114		A0A1W2PQM1	296 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	TMEM202	A6NGA9	273 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	LRRC10B	A6NIK2	292 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	LRRC53	A6NM62	1247 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	TMEM110-MUSTN1	A8MSY1	372 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	CDRT15L2	A8MXV6	281 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114		B4DGG1	531 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	ERVH48-1	M5A8F1	160 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	RECQL5	O94762	991 aa	Predicted RBP	11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	TNF	P01375	233 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	CCDC172	P0C7W6	258 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	MIP	P30301	263 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	SUOX	P51687	545 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	BCL2L1	Q07817	233 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	VAC14	Q08AM6	782 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	MTM1	Q13496	603 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	ASIC2	Q16515	512 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	DENND2C	Q68D51	928 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	LIPI	Q6XZB0	460 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	TAF8	Q7Z7C8	310 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	ZNF605	Q86T29	641 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	JAML	Q86YT9	394 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	PELI3	Q8N2H9	469 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	ARL14	Q8N4G2	192 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	HCAR2	Q8TDS4	363 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	FUBP1	Q96AE4	644 aa	Known RBP	11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	TUBGCP5	Q96RT8	1024 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	SYT11	Q9BT88	431 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	SEMA4C	Q9C0C4	833 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	FGF22	Q9HCT0	170 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	MYO1A	Q9UBC5	1043 aa		11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	11.69	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114		D6RAR5	112 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	CACNB4	O00305	520 aa	Predicted RBP	11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	PLD2	O14939	933 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	PRPSAP2	O60256	369 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	RNF8	O76064	485 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	FTL	P02792	175 aa	Predicted RBP	11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	PLA2G2A	P14555	144 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	GM2A	P17900	193 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	HTR7	P34969	479 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	ANP32A	P39687	249 aa	Known RBP	11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	INHBC	P55103	352 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	RHD	Q02161	417 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	TYRO3	Q06418	890 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	CLN3	Q13286	438 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	ACOX1	Q15067	660 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	SMTNL2	Q2TAL5	461 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	AFMID	Q63HM1	303 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	E4F1	Q66K89	784 aa	Predicted RBP	11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	PLEKHA7	Q6IQ23	1121 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	LVRN	Q6Q4G3	990 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	IGF2-AS	Q6U949	168 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	RAB11FIP2	Q7L804	512 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	ZNF571	Q7Z3V5	609 aa	Predicted RBP	11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	CCNJL	Q8IV13	435 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	FBXO39	Q8N4B4	442 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	FAM46D	Q8NEK8	389 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	OR56A4	Q8NGH8	313 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	ATL2	Q8NHH9	583 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	CCL4L1	Q8NHW4	92 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	WDR48	Q8TAF3	677 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	ZNF653	Q96CK0	615 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	GRAMD1A	Q96CP6	724 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	GBP4	Q96PP9	640 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	RBM15	Q96T37	977 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	LGR4	Q9BXB1	951 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	TMEM168	Q9H0V1	697 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	LRRN3	Q9H3W5	708 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	HAUS4	Q9H6D7	363 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	CYP4F12	Q9HCS2	524 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	DONSON	Q9NYP3	566 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	CWC15	Q9P013	229 aa	Known RBP	11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	CNOT8	Q9UFF9	292 aa	Known RBP	11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	PISD	Q9UG56	409 aa		11.68	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	TMEM191C	A6NGB0	347 aa		11.67	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	ITGA2B	P08514	1039 aa		11.67	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	SKIL	P12757	684 aa		11.67	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	TCF4	P15884	667 aa		11.67	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	SLC5A2	P31639	672 aa		11.67	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	UGT1A5	P35504	534 aa		11.67	□□□□□ -0.54
CDK5RAP3-223	ENST00000582114	CSNK1D	P48730	415 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms