RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 SLC35F5Q8WV83 523 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 SLC25A28Q96A46 364 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 FAM149B1Q96BN6 582 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 GFM1Q96RP9 751 aaKnown RBP4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 MAP7D2Q96T17 732 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 TKTL2Q9H0I9 626 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 ISCUQ9H1K1 167 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 KIF9Q9HAQ2 790 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 FBRSL1Q9HCM7 1045 aaKnown RBP4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 BPIFA1Q9NP55 256 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 SLC6A13Q9NSD5 602 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 SIRT3Q9NTG7 399 aaPredicted RBP4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 ANKRD10Q9NXR5 420 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 GPR34Q9UPC5 381 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 LYVE1Q9Y5Y7 322 aa4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 RSF1Q96T23 1441 aaPredicted RBP4.86□□□□□ -1.63
SMCHD1-205ENST00000581383 IGLV5-39A0A0G2JS06 123 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 A0A0U1RQF3 1178 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 GAGE12JA6NER3 117 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 MYO1GB0I1T2 1018 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 GTPBP1O00178 669 aaKnown RBP4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 CHL1O00533 1208 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 PAGE4O60829 102 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 RGS11O94810 467 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 KRT10P13645 584 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 ETFAP13804 333 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 CDAP32320 146 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 PPARGP37231 505 aaPredicted RBP4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 SELENOVP59797 346 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 PTGR1Q14914 329 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 DCAF12L2Q5VW00 463 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 NCEH1Q6PIU2 408 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 FBXO46Q6PJ61 603 aaPredicted RBP4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 PARM1Q6UWI2 310 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 WDTC1Q8N5D0 677 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 TEX45Q8NA69 505 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 SMRP1Q8NCR6 262 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 GABPB2Q8TAK5 448 aaPredicted RBP4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 BICD2Q8TD16 824 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 GPT2Q8TD30 523 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 LPAR1Q92633 364 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 ARHGEF2Q92974 986 aaKnown RBP4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 MSTO1Q9BUK6 570 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 STRA6Q9BX79 667 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 MAGEE1Q9HCI5 957 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 ASAH2Q9NR71 780 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 SMYD2Q9NRG4 433 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 PLK2Q9NYY3 685 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 ZNF112Q9UJU3 913 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 AAR2Q9Y312 384 aaKnown RBP4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 ADAM18Q9Y3Q7 739 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 UTYO14607 1347 aa4.85□□□□□ -1.63
SMCHD1-205ENST00000581383 CACNA1IQ9P0X4 2223 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 A0A1W2PQF6 199 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 LACTBL1A8MY62 500 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 PTGES3LE9PB15 166 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 H0YGN5 161 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 TAF4O00268 1085 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 KLK8O60259 260 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 MTA2O94776 668 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 SHMT1P34896 483 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 HOXD13P35453 343 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 HADHAP40939 763 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 THBS3P49746 956 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 P2RX3P56373 397 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 SRSF1Q07955 248 aaKnown RBP eCLIP4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 TCTN1Q2MV58 587 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 PRTGQ2VWP7 1150 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 ODF3L2Q3SX64 289 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 SGO1Q5FBB7 561 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 HIST2H2BCQ6DN03 193 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 HIST2H2BDQ6DRA6 164 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 LCTLQ6UWM7 567 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 MEPCEQ7L2J0 689 aaKnown RBP4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 HAPLN4Q86UW8 402 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 PALB2Q86YC2 1186 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 CCDC105Q8IYK2 499 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 C7orf57Q8NEG2 295 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 NEK9Q8TD19 979 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 SCFD2Q8WU76 684 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 FBXL8Q96CD0 374 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 MMABQ96EY8 250 aaPredicted RBP4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 APOLD1Q96LR9 279 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 CMTM3Q96MX0 182 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 KAT14Q9H8E8 782 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 CYSLTR2Q9NS75 346 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 ABI3Q9P2A4 366 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 CNOT8Q9UFF9 292 aaKnown RBP4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 TBC1D29Q9UFV1 150 aa4.84□□□□□ -1.63
SMCHD1-205ENST00000581383 FAM237AA0A1B0GTK4 181 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 KDM4EB2RXH2 506 aaPredicted RBP4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 I6L893 689 aaPredicted RBP4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 K7ENM7 598 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 VILLO15195 856 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 LDB2O43679 373 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 FGF2P09038 288 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 IL7RP16871 459 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 TNFRSF1BP20333 461 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 AGAP20933 346 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 TM4SF1P30408 202 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms