RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 MAGEA6P43360 314 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 FAM193AP78312 1265 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PDE1BQ01064 536 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 GALNT3Q14435 633 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 MORF4L2Q15014 288 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SLC1A5Q15758 541 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 KCTD11Q693B1 232 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 KIAA1161Q6NSJ0 714 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 NEK5Q6P3R8 708 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PRUNE1Q86TP1 453 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SLC25A41Q8N5S1 370 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 AADATQ8N5Z0 425 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 OR14C36Q8NHC7 312 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PIH1D2Q8WWB5 315 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 LRRC1Q9BTT6 524 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 FAM129AQ9BZQ8 928 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TRIM31Q9BZY9 425 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SLC6A17Q9H1V8 727 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 NEUROG2Q9H2A3 272 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TRABDQ9H4I3 376 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PREBQ9HCU5 417 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 FAM114A2Q9NRY5 505 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 POLR3BQ9NW08 1133 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 C2orf42Q9NWW7 574 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 KCTD5Q9NXV2 234 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 BFARQ9NZS9 450 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 WHRNQ9P202 907 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ANAPC5Q9UJX4 755 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PPIL1Q9Y3C6 166 aa11.33□□□□□ -0.6
CDK5RAP3-210ENST00000578733 RALGAPA1Q6GYQ0 2036 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 BHMG1C9JSJ3 638 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 RIOK3O14730 519 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PLRG1O43660 514 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SEC31AO94979 1220 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PCDH8O95206 1070 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CRTAMO95727 393 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SEMA4FO95754 770 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 AGTP01019 485 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PDHA1P08559 390 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ELFN1P0C7U0 828 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TIMP2P16035 220 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 VIPR1P32241 457 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ADRA1AP35348 466 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 DRD3P35462 400 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PXNP49023 591 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TERF1P54274 439 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 KCNJ11Q14654 390 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ANGPT1Q15389 498 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 QPCTQ16769 361 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SIRPB2Q5JXA9 342 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PIP5KL1Q5T9C9 394 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 RNASEH2BQ5TBB1 312 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 AGBL4Q5VU57 503 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ARMC3Q5W041 872 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 LRRC8BQ6P9F7 803 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 RANBP10Q6VN20 620 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CEP128Q6ZU80 1094 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 DPPA4Q7L190 304 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 FAM124AQ86V42 546 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 IFT20Q8IY31 132 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 RAVER1Q8IY67 606 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 MCUQ8NE86 351 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 OR2T34Q8NGX1 318 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CPT1BQ92523 772 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 FAM131CQ96AQ9 280 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 MCCC1Q96RQ3 725 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TRIB3Q96RU7 358 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 GORASP1Q9BQQ3 440 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 C1QTNF7Q9BXJ2 289 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PCED1AQ9H1Q7 454 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 DPH5Q9H2P9 285 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ARNT2Q9HBZ2 717 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 MAGEE1Q9HCI5 957 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PCDH12Q9NPG4 1184 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 RRAGDQ9NQL2 400 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 SHOC2Q9UQ13 582 aa11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TNRC6BQ9UPQ9 1833 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-210ENST00000578733 DMXL1Q9Y485 3027 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TBC1D3DA0A087WVF3 549 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TBC1D3IA0A087WXS9 549 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TBC1D3EA0A087X179 549 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TBC1D3KA0A087X1G2 549 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TBC1D3FA6NER0 549 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 C2orf81A6NN90 581 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TBC1D3LB9A6J9 549 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 PSMD11O00231 422 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ATXN1LP0C7T5 689 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 TBC1D3HP0C7X1 549 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 MLNP12872 115 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 CTPS1P17812 591 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 HNF1BP35680 557 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 NUDT1P36639 197 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 MMP12P39900 470 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ABL2P42684 1182 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 NPY2RP49146 381 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 FNTBP49356 437 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 ADPRHP54922 357 aa11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 DRG2P55039 364 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 RPS21P63220 83 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-210ENST00000578733 GUCY2DQ02846 1103 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms