RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 UCMAQ8WVF2 138 aa18.64■□□□□ 0.57
PRKCA-203ENST00000578063 MYLIPQ8WY64 445 aa18.64■□□□□ 0.57
PRKCA-203ENST00000578063 NXPE3Q969Y0 559 aa18.64■□□□□ 0.57
PRKCA-203ENST00000578063 SMC6Q96SB8 1091 aa18.64■□□□□ 0.57
PRKCA-203ENST00000578063 SELENOSQ9BQE4 189 aa18.64■□□□□ 0.57
PRKCA-203ENST00000578063 RPP25Q9BUL9 199 aaKnown RBP18.64■□□□□ 0.57
PRKCA-203ENST00000578063 ZDHHC6Q9H6R6 413 aa18.64■□□□□ 0.57
PRKCA-203ENST00000578063 BRD9Q9H8M2 597 aa18.64■□□□□ 0.57
PRKCA-203ENST00000578063 SLC17A6Q9P2U8 582 aa18.64■□□□□ 0.57
PRKCA-203ENST00000578063 ADAM21Q9UKJ8 722 aa18.64■□□□□ 0.57
PRKCA-203ENST00000578063 GRXCR2A6NFK2 248 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 TTC34A8MYJ7 566 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 TRIM49D1C9J1S8 452 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 BRAFP15056 766 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 GKP32189 559 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 ATP1A2P50993 1020 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 ZNF140P52738 457 aaPredicted RBP18.63■□□□□ 0.57
PRKCA-203ENST00000578063 CSE1LP55060 971 aaKnown RBP18.63■□□□□ 0.57
PRKCA-203ENST00000578063 PRAMEP78395 509 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 SKIV2LQ15477 1246 aaKnown RBP18.63■□□□□ 0.57
PRKCA-203ENST00000578063 SMAD1Q15797 465 aaKnown RBP18.63■□□□□ 0.57
PRKCA-203ENST00000578063 UGP2Q16851 508 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 LMNTD2Q8IXW0 634 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 TTC8Q8TAM2 541 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 ECHDC3Q96DC8 303 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 AGAP2Q99490 1192 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 SUV39H2Q9H5I1 410 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 UBE2ZQ9H832 354 aaPredicted RBP18.63■□□□□ 0.57
PRKCA-203ENST00000578063 MAGEE1Q9HCI5 957 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 PSAT1Q9Y617 370 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 KIAA1549LQ6ZVL6 1849 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 FOXO6A8MYZ6 492 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 RPP40O75818 363 aaKnown RBP18.63■□□□□ 0.57
PRKCA-203ENST00000578063 MT-ND3P03897 115 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 SP100P23497 879 aaPredicted RBP18.63■□□□□ 0.57
PRKCA-203ENST00000578063 PSMA3P25788 255 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 SLC8A1P32418 973 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 MESP2Q0VG99 397 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 DNAJC3Q13217 504 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 CCDC85BQ15834 202 aaPredicted RBP18.63■□□□□ 0.57
PRKCA-203ENST00000578063 NUDT18Q6ZVK8 323 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 STRA8Q7Z7C7 330 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 NDUFAF2Q8N183 169 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 MDGA1Q8NFP4 955 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 VOPP1Q96AW1 172 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 ALKBH8Q96BT7 664 aaKnown RBP18.63■□□□□ 0.57
PRKCA-203ENST00000578063 LRIG1Q96JA1 1093 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 DNAJC1Q96KC8 554 aaKnown RBP18.63■□□□□ 0.57
PRKCA-203ENST00000578063 RBBP8Q99708 897 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 HEPHQ9BQS7 1158 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 MFSD1Q9H3U5 465 aa18.63■□□□□ 0.57
PRKCA-203ENST00000578063 SSU72Q9NP77 194 aaKnown RBP18.63■□□□□ 0.57
PRKCA-203ENST00000578063 A0A0J9YYE9 177 aa18.62■□□□□ 0.57
PRKCA-203ENST00000578063 TBC1D3BA6NDS4 549 aa18.62■□□□□ 0.57
PRKCA-203ENST00000578063 GOLGA8TH3BQL2 631 aa18.62■□□□□ 0.57
PRKCA-203ENST00000578063 TRBC1P01850 177 aa18.62■□□□□ 0.57
PRKCA-203ENST00000578063 LPOP22079 712 aaPredicted RBP18.62■□□□□ 0.57
PRKCA-203ENST00000578063 KCNA5P22460 613 aa18.62■□□□□ 0.57
PRKCA-203ENST00000578063 SPRP35270 261 aaPredicted RBP18.62■□□□□ 0.57
PRKCA-203ENST00000578063 GRIA2P42262 883 aa18.62■□□□□ 0.57
PRKCA-203ENST00000578063 NEPROQ6NW34 567 aa18.62■□□□□ 0.57
PRKCA-203ENST00000578063 KIAA0408Q6ZU52 694 aa18.62■□□□□ 0.57
PRKCA-203ENST00000578063 CHST14Q8NCH0 376 aa18.62■□□□□ 0.57
PRKCA-203ENST00000578063 CSGALNACT1Q8TDX6 532 aa18.62■□□□□ 0.57
PRKCA-203ENST00000578063 PTPRN2Q92932 1015 aa18.62■□□□□ 0.57
PRKCA-203ENST00000578063 OSBPL1AQ9BXW6 950 aa18.62■□□□□ 0.57
PRKCA-203ENST00000578063 NLE1Q9NVX2 485 aaPredicted RBP18.62■□□□□ 0.57
PRKCA-203ENST00000578063 GGT7Q9UJ14 662 aa18.62■□□□□ 0.57
PRKCA-203ENST00000578063 PHTF1Q9UMS5 762 aa18.62■□□□□ 0.57
PRKCA-203ENST00000578063 SMG5Q9UPR3 1016 aaKnown RBP18.62■□□□□ 0.57
PRKCA-203ENST00000578063 ZNF711Q9Y462 761 aa18.62■□□□□ 0.57
PRKCA-203ENST00000578063 KCTD3Q9Y597 815 aa18.62■□□□□ 0.57
PRKCA-203ENST00000578063 A0A1W2PPM1 405 aa18.61■□□□□ 0.57
PRKCA-203ENST00000578063 CAPN8A6NHC0 703 aa18.61■□□□□ 0.57
PRKCA-203ENST00000578063 A6NNZ2 444 aa18.61■□□□□ 0.57
PRKCA-203ENST00000578063 KAT7O95251 611 aa18.61■□□□□ 0.57
PRKCA-203ENST00000578063 ITGA2BP08514 1039 aa18.61■□□□□ 0.57
PRKCA-203ENST00000578063 ABL2P42684 1182 aa18.61■□□□□ 0.57
PRKCA-203ENST00000578063 LIMK2P53671 638 aa18.61■□□□□ 0.57
PRKCA-203ENST00000578063 BMPR2Q13873 1038 aa18.61■□□□□ 0.57
PRKCA-203ENST00000578063 TUBB8Q3ZCM7 444 aa18.61■□□□□ 0.57
PRKCA-203ENST00000578063 FNDC3BQ53EP0 1204 aaKnown RBP18.61■□□□□ 0.57
PRKCA-203ENST00000578063 ZNF470Q6ECI4 717 aa18.61■□□□□ 0.57
PRKCA-203ENST00000578063 GDPD4Q6W3E5 623 aa18.61■□□□□ 0.57
PRKCA-203ENST00000578063 TIFABQ6ZNK6 161 aa18.61■□□□□ 0.57
PRKCA-203ENST00000578063 SUGP1Q8IWZ8 645 aaKnown RBP18.61■□□□□ 0.57
PRKCA-203ENST00000578063 TTC30BQ8N4P2 665 aa18.61■□□□□ 0.57
PRKCA-203ENST00000578063 HDAC10Q969S8 669 aa18.61■□□□□ 0.57
PRKCA-203ENST00000578063 CHFRQ96EP1 664 aa18.61■□□□□ 0.57
PRKCA-203ENST00000578063 C19orf43Q9BQ61 176 aa18.61■□□□□ 0.57
PRKCA-203ENST00000578063 TMEM120BA0PK00 339 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 AURKAO14965 403 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 PRPF4O43172 522 aaKnown RBP eCLIP18.6■□□□□ 0.57
PRKCA-203ENST00000578063 MBTPS2O43462 519 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 APODP05090 189 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 UGT2B4P06133 528 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 CREB1P16220 341 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 KRT4P19013 534 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 ARSDP51689 593 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 MROH9Q5TGP6 573 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms