RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 BBS5Q8N3I7 341 aa10.16□□□□□ -0.78
CRLF3-202ENST00000577725 ATP2A3Q93084 1043 aa10.16□□□□□ -0.78
CRLF3-202ENST00000577725 FAM83CQ9BQN1 747 aa10.16□□□□□ -0.78
CRLF3-202ENST00000577725 MGME1Q9BQP7 344 aa10.16□□□□□ -0.78
CRLF3-202ENST00000577725 C2orf49Q9BVC5 232 aaPredicted RBP10.16□□□□□ -0.78
CRLF3-202ENST00000577725 TM6SF2Q9BZW4 377 aa10.16□□□□□ -0.78
CRLF3-202ENST00000577725 TNKS2Q9H2K2 1166 aa10.16□□□□□ -0.78
CRLF3-202ENST00000577725 BRD9Q9H8M2 597 aa10.16□□□□□ -0.78
CRLF3-202ENST00000577725 ECT2Q9H8V3 914 aa10.16□□□□□ -0.78
CRLF3-202ENST00000577725 LRRC40Q9H9A6 602 aa10.16□□□□□ -0.78
CRLF3-202ENST00000577725 VPS37BQ9H9H4 285 aa10.16□□□□□ -0.78
CRLF3-202ENST00000577725 NOD2Q9HC29 1040 aa10.16□□□□□ -0.78
CRLF3-202ENST00000577725 CASS4Q9NQ75 786 aa10.16□□□□□ -0.78
CRLF3-202ENST00000577725 MAD1L1Q9Y6D9 718 aa10.16□□□□□ -0.78
CRLF3-202ENST00000577725 KIAA1549LQ6ZVL6 1849 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 MYO18BQ8IUG5 2567 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 GOLGA6CA6NDK9 693 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 GOLGA6BA6NDN3 693 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 ANTXRLA6NF34 631 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 AGPSO00116 658 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 KHNYNO15037 678 aaKnown RBP10.15□□□□□ -0.78
CRLF3-202ENST00000577725 EIF3HO15372 352 aaKnown RBP eCLIP10.15□□□□□ -0.78
CRLF3-202ENST00000577725 PSMD3O43242 534 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 ATP9BO43861 1147 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 BNIP3LO60238 219 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 TULP3O75386 442 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 SUN1O94901 812 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 TTC4O95801 387 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 GOLGA6DP0CG33 693 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 SRCP12931 536 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 SSTR1P30872 391 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 GKP32189 559 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 ADRA1AP35348 466 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 MAGEA3P43357 314 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 SOX9P48436 509 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 DGKGP49619 791 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 SERPINH1P50454 418 aaKnown RBP10.15□□□□□ -0.78
CRLF3-202ENST00000577725 SARNPP82979 210 aaKnown RBP10.15□□□□□ -0.78
CRLF3-202ENST00000577725 KCNC4Q03721 635 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 MPP3Q13368 585 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 SLC29A2Q14542 456 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 RFTN1Q14699 578 aaPredicted RBP10.15□□□□□ -0.78
CRLF3-202ENST00000577725 EFTUD2Q15029 972 aaKnown RBP eCLIP10.15□□□□□ -0.78
CRLF3-202ENST00000577725 PLK5Q496M5 336 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 CCDC38Q502W7 563 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 GRAMD4Q6IC98 578 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 CASC4Q6P4E1 433 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 CES3Q6UWW8 571 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 Q6ZS52 159 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 ADIPOR2Q86V24 386 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 CPA6Q8N4T0 437 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 DNAAF3Q8N9W5 541 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 ATP11CQ8NB49 1132 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 MDM1Q8TC05 714 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 PYROXD1Q8WU10 500 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 ELSPBP1Q96BH3 223 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 SIGLEC10Q96LC7 697 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 SMIM14Q96QK8 99 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 PSKH2Q96QS6 385 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 XPO6Q96QU8 1125 aaKnown RBP10.15□□□□□ -0.78
CRLF3-202ENST00000577725 POLR1EQ9GZS1 481 aaKnown RBP10.15□□□□□ -0.78
CRLF3-202ENST00000577725 TSPYL1Q9H0U9 437 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 PABPC3Q9H361 631 aaKnown RBP10.15□□□□□ -0.78
CRLF3-202ENST00000577725 XAB2Q9HCS7 855 aaKnown RBP10.15□□□□□ -0.78
CRLF3-202ENST00000577725 TRPV5Q9NQA5 729 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 C2orf42Q9NWW7 574 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 GOLGA6AQ9NYA3 693 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 GTSE1Q9NYZ3 720 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 TEX264Q9Y6I9 313 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 ZNF462Q96JM2 2506 aa10.15□□□□□ -0.78
CRLF3-202ENST00000577725 PIAS1O75925 651 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 RHOBTB1O94844 696 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 PIGNO95427 931 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 PRKCGP05129 697 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 PSMC3P17980 439 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 POLR2EP19388 210 aaKnown RBP10.14□□□□□ -0.79
CRLF3-202ENST00000577725 CR2P20023 1033 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 OPRD1P41143 372 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 CDK16Q00536 496 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 ZNF844Q08AG5 666 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 FCHO2Q0JRZ9 810 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 TRAF2Q12933 501 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 SLC12A1Q13621 1099 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 RUNX3Q13761 415 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 SEPT6Q14141 434 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 GALNT3Q14435 633 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 ZNF423Q2M1K9 1284 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 ACCSLQ4AC99 568 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 DGKKQ5KSL6 1271 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 CEP85LQ5SZL2 805 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 NAPEPLDQ6IQ20 393 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 DENND5AQ6IQ26 1287 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 RETSATQ6NUM9 610 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 C22orf39Q6P5X5 142 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 CEP128Q6ZU80 1094 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 KIAA0907Q7Z7F0 614 aaPredicted RBP10.14□□□□□ -0.79
CRLF3-202ENST00000577725 SRLQ86TD4 932 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 RELL1Q8IUW5 271 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 ETFBKMTQ8IXQ9 262 aa10.14□□□□□ -0.79
CRLF3-202ENST00000577725 PALM2Q8IXS6 379 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms