RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 YME1L1Q96TA2 773 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 MPHOSPH8Q99549 860 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 DCLK3Q9C098 648 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 LHPPQ9H008 270 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 SPRTNQ9H040 489 aaPredicted RBP2.62□□□□□ -1.99
COPS3-213ENST00000577210 MUC13Q9H3R2 512 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 SH2D4AQ9H788 454 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 PLEKHA5Q9HAU0 1116 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 MAGEE1Q9HCI5 957 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 EIF2B3Q9NR50 452 aaKnown RBP2.62□□□□□ -1.99
COPS3-213ENST00000577210 CYSLTR2Q9NS75 346 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 TBC1D22BQ9NU19 505 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 ZBTB40Q9NUA8 1239 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 BLOC1S4Q9NUP1 217 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 HCFC1R1Q9NWW0 138 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 SELENONQ9NZV5 590 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 HSPB7Q9UBY9 170 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 NAALADL1Q9UQQ1 740 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 RAI2Q9Y5P3 530 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 KCNE2Q9Y6J6 123 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 A3GALT2U3KPV4 340 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 ADGRF5Q8IZF2 1346 aa2.62□□□□□ -1.99
COPS3-213ENST00000577210 ATXN2Q99700 1313 aaKnown RBP2.62□□□□□ -1.99
COPS3-213ENST00000577210 A0A0U1RQF3 1178 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 A0A1W2PPC1 479 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 PI4KAP2A4QPH2 592 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 A6NCN8 305 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 GOLGA6L9A6NEM1 432 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 FAM90A8PA6NJQ4 464 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 CD8B2A6NJW9 211 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 HSPB2A8KAH6 182 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 MYO1GB0I1T2 1018 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 FIBPO43427 364 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 PAGE4O60829 102 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 VNN2O95498 520 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 TOMM40O96008 361 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 EIF2S1P05198 315 aaKnown RBP2.61□□□□□ -1.99
COPS3-213ENST00000577210 FAM90A13PP0C7W8 464 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 FAM90A24PP0C7X0 464 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 CAPN3P20807 821 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 AGAP20933 346 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 NFKBIAP25963 317 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 AMTP48728 403 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 RPS3AP61247 264 aaKnown RBP2.61□□□□□ -1.99
COPS3-213ENST00000577210 NIPAL4Q0D2K0 466 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 TDGQ13569 410 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 CAPSQ13938 189 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 KRT32Q14532 448 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 HSPB2Q16082 182 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 ESCO2Q56NI9 601 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 TDRD12Q587J7 1177 aaKnown RBP2.61□□□□□ -1.99
COPS3-213ENST00000577210 PRAMEF19Q5SWL8 479 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 GPATCH4Q5T3I0 446 aaKnown RBP2.61□□□□□ -1.99
COPS3-213ENST00000577210 ASPHD1Q5U4P2 390 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 LRCH2Q5VUJ6 765 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 GGNBP1Q5YKI7 109 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 ITPRIPL1Q6GPH6 555 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 ZNF367Q7RTV3 350 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 CACNA2D4Q7Z3S7 1137 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.61□□□□□ -1.99
COPS3-213ENST00000577210 GPSM1Q86YR5 675 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 EPHX4Q8IUS5 362 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 ARHGAP12Q8IWW6 846 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 MB21D2Q8IYB1 491 aaPredicted RBP2.61□□□□□ -1.99
COPS3-213ENST00000577210 TEX11Q8IYF3 940 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 RNF168Q8IYW5 571 aaPredicted RBP2.61□□□□□ -1.99
COPS3-213ENST00000577210 NRACQ8N912 160 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 OR14A16Q8NHC5 309 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 DNAAF4Q8WXU2 420 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 INPP5DQ92835 1189 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 NAF1Q96HR8 494 aaKnown RBP2.61□□□□□ -1.99
COPS3-213ENST00000577210 PGAM5Q96HS1 289 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 ZNF778Q96MU6 729 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 FAM110AQ9BQ89 295 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 TMEM47Q9BQJ4 181 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 TMEM204Q9BSN7 226 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 CENPOQ9BU64 300 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 C1QTNF1Q9BXJ1 281 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 NPFFR1Q9GZQ6 430 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 SIL1Q9H173 461 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 PLEKHA4Q9H4M7 779 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 FBRSL1Q9HCM7 1045 aaKnown RBP2.61□□□□□ -1.99
COPS3-213ENST00000577210 TMEM51Q9NW97 253 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 NSMCE4AQ9NXX6 385 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 PLEKHB1Q9UF11 243 aaPredicted RBP2.61□□□□□ -1.99
COPS3-213ENST00000577210 MYO6Q9UM54 1294 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 NFE2L3Q9Y4A8 694 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 MAU2Q9Y6X3 613 aa2.61□□□□□ -1.99
COPS3-213ENST00000577210 ARHGEF17Q96PE2 2063 aaPredicted RBP2.61□□□□□ -1.99
COPS3-213ENST00000577210 COL3A1P02461 1466 aaPredicted RBP2.6□□□□□ -1.99
COPS3-213ENST00000577210 IGHV4-28A0A0C4DH34 117 aa2.6□□□□□ -1.99
COPS3-213ENST00000577210 TMEM202A6NGA9 273 aa2.6□□□□□ -1.99
COPS3-213ENST00000577210 NPIPB15A6NHN6 443 aaPredicted RBP2.6□□□□□ -1.99
COPS3-213ENST00000577210 LIPT2A6NK58 231 aa2.6□□□□□ -1.99
COPS3-213ENST00000577210 TCERG1O14776 1098 aaKnown RBP2.6□□□□□ -1.99
COPS3-213ENST00000577210 TNFRSF13BO14836 293 aaPredicted RBP2.6□□□□□ -1.99
COPS3-213ENST00000577210 INSIG1O15503 277 aa2.6□□□□□ -1.99
COPS3-213ENST00000577210 HCRTR2O43614 444 aa2.6□□□□□ -1.99
COPS3-213ENST00000577210 LDB2O43679 373 aa2.6□□□□□ -1.99
COPS3-213ENST00000577210 ZNF500O60304 480 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms