RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 PCDH12Q9NPG4 1184 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 TMPRSS4Q9NRS4 437 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 DONSONQ9NYP3 566 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 DNAI1Q9UI46 699 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 MAN1B1Q9UKM7 699 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 CTNND2Q9UQB3 1225 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 DAAM1Q9Y4D1 1078 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 MYH10P35580 1976 aa9.06□□□□□ -0.96
SMG6-218ENST00000575454 SPTBN1Q01082 2364 aaKnown RBP9.06□□□□□ -0.96
SMG6-218ENST00000575454 TSPAN11A1L157 253 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 B4E171 279 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 AGRPO00253 132 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 FOXN3O00409 490 aaPredicted RBP9.05□□□□□ -0.96
SMG6-218ENST00000575454 B4GAT1O43505 415 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 CCL4P13236 92 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 LIFP15018 202 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 ITIH2P19823 946 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 MAP4P27816 1152 aaKnown RBP9.05□□□□□ -0.96
SMG6-218ENST00000575454 ALDH4A1P30038 563 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 UGT1A3P35503 534 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 CLCN1P35523 988 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 FLT3P36888 993 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 TSPAN7P41732 249 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 NOP2P46087 812 aaKnown RBP9.05□□□□□ -0.96
SMG6-218ENST00000575454 LIMK2P53671 638 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 YBEYP58557 167 aaPredicted RBP9.05□□□□□ -0.96
SMG6-218ENST00000575454 POLR2LP62875 67 aaKnown RBP9.05□□□□□ -0.96
SMG6-218ENST00000575454 ILF3Q12906 894 aaKnown RBP eCLIP9.05□□□□□ -0.963e-6■■■□□ 18.5
SMG6-218ENST00000575454 SQSTM1Q13501 440 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 RAPGEF1Q13905 1077 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 NR1D2Q14995 579 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 PARP15Q460N3 678 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 DCAF12Q5T6F0 453 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 MANEALQ5VSG8 457 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 ISM2Q6H9L7 571 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 LEKR1Q6ZMV7 388 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 ZNF438Q7Z4V0 828 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 DNAAF5Q86Y56 855 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 FAM71AQ8IYT1 594 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 OR4D9Q8NGE8 314 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 APOBEC4Q8WW27 367 aaKnown RBP9.05□□□□□ -0.96
SMG6-218ENST00000575454 OR1E3Q8WZA6 343 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 SLC45A3Q96JT2 553 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 CFAP57Q96MR6 1250 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 TEFMQ96QE5 360 aaKnown RBP9.05□□□□□ -0.96
SMG6-218ENST00000575454 TUBGCP5Q96RT8 1024 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 TMEM168Q9H0V1 697 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 WDR26Q9H7D7 661 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 RDH14Q9HBH5 336 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 GDPD2Q9HCC8 539 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 PLCB1Q9NQ66 1216 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 NDFIP2Q9NV92 336 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 TMEM59LQ9UK28 342 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 DNAJC12Q9UKB3 198 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 ATP8A1Q9Y2Q0 1164 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 COQ6Q9Y2Z9 468 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 FBN2P35556 2912 aa9.05□□□□□ -0.96
SMG6-218ENST00000575454 IGHV5-10-1A0A0J9YXX1 117 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 TMEM202A6NGA9 273 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 GOLGA8SH3BPF8 625 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 RAD1O60671 282 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 LRIG2O94898 1065 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 PLEKP08567 350 aaPredicted RBP9.04□□□□□ -0.96
SMG6-218ENST00000575454 FGF3P11487 239 aaPredicted RBP9.04□□□□□ -0.96
SMG6-218ENST00000575454 CCNB1P14635 433 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 CYP11B1P15538 503 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 PON1P27169 355 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 CD1CP29017 333 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 SDC4P31431 198 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 TRIM23P36406 574 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 MMP12P39900 470 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 COPB1P53618 953 aaKnown RBP9.04□□□□□ -0.96
SMG6-218ENST00000575454 STX17P56962 302 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 OR1D5P58170 312 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 ATP11AP98196 1134 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 KLRB1Q12918 225 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 TMPRSS9Q7Z410 1059 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 C17orf82Q86X59 251 aaPredicted RBP9.04□□□□□ -0.96
SMG6-218ENST00000575454 CREBRFQ8IUR6 639 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 ZDHHC1Q8WTX9 485 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 FUBP1Q96AE4 644 aaKnown RBP9.04□□□□□ -0.96
SMG6-218ENST00000575454 CCDC74BQ96LY2 380 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 ZPBPQ9BS86 351 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 GSDMCQ9BYG8 508 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 TRIT1Q9H3H1 467 aaKnown RBP9.04□□□□□ -0.96
SMG6-218ENST00000575454 ATP13A3Q9H7F0 1226 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 GPN2Q9H9Y4 310 aaPredicted RBP9.04□□□□□ -0.96
SMG6-218ENST00000575454 CYP4F12Q9HCS2 524 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 FGF22Q9HCT0 170 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 TRNAU1APQ9NX07 287 aaKnown RBP9.04□□□□□ -0.96
SMG6-218ENST00000575454 KCTD5Q9NXV2 234 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 SLC39A1Q9NY26 324 aa9.04□□□□□ -0.96
SMG6-218ENST00000575454 BLACEA4D250 179 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 ENO4A6NNW6 628 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 RECQL5O94762 991 aaPredicted RBP9.03□□□□□ -0.96
SMG6-218ENST00000575454 ELFN1P0C7U0 828 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 BMP6P22004 513 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 EPHB2P29323 1055 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 SERPINA4P29622 427 aa9.03□□□□□ -0.96
SMG6-218ENST00000575454 CSNK1DP48730 415 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms