RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 EIF3CLB5ME19 914 aaKnown RBP15.3■□□□□ 0.04
CTNS-209ENST00000574776 NTN3O00634 580 aaPredicted RBP15.3■□□□□ 0.04
CTNS-209ENST00000574776 RNF8O76064 485 aa15.3■□□□□ 0.04
CTNS-209ENST00000574776 RECQL5O94762 991 aaPredicted RBP15.3■□□□□ 0.04
CTNS-209ENST00000574776 ZIC2O95409 532 aaPredicted RBP15.3■□□□□ 0.04
CTNS-209ENST00000574776 FTLP02792 175 aaPredicted RBP15.3■□□□□ 0.04
CTNS-209ENST00000574776 MIPP30301 263 aa15.3■□□□□ 0.04
CTNS-209ENST00000574776 SCNN1BP51168 640 aa15.3■□□□□ 0.04
CTNS-209ENST00000574776 PDX1P52945 283 aa15.3■□□□□ 0.04
CTNS-209ENST00000574776 BCL2L1Q07817 233 aa15.3■□□□□ 0.04
CTNS-209ENST00000574776 NSUN2Q08J23 767 aaKnown RBP eCLIP15.3■□□□□ 0.04
CTNS-209ENST00000574776 MTM1Q13496 603 aa15.3■□□□□ 0.04
CTNS-209ENST00000574776 TAF1BQ53T94 588 aaPredicted RBP15.3■□□□□ 0.04
CTNS-209ENST00000574776 PPP1R2P3Q6NXS1 205 aa15.3■□□□□ 0.04
CTNS-209ENST00000574776 LIPIQ6XZB0 460 aa15.3■□□□□ 0.04
CTNS-209ENST00000574776 TP53INP2Q8IXH6 220 aa15.3■□□□□ 0.04
CTNS-209ENST00000574776 SDR16C5Q8N3Y7 309 aa15.3■□□□□ 0.04
CTNS-209ENST00000574776 ZNF843Q8N446 348 aa15.3■□□□□ 0.04
CTNS-209ENST00000574776 ARL14Q8N4G2 192 aa15.3■□□□□ 0.04
CTNS-209ENST00000574776 UNC13CQ8NB66 2214 aa15.3■□□□□ 0.04
CTNS-209ENST00000574776 ATL2Q8NHH9 583 aa15.3■□□□□ 0.04
CTNS-209ENST00000574776 NSMCE3Q96MG7 304 aa15.3■□□□□ 0.04
CTNS-209ENST00000574776 EIF3CQ99613 913 aaKnown RBP15.3■□□□□ 0.04
CTNS-209ENST00000574776 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.3■□□□□ 0.04
CTNS-209ENST00000574776 HAUS4Q9H6D7 363 aa15.3■□□□□ 0.04
CTNS-209ENST00000574776 SP110Q9HB58 689 aa15.3■□□□□ 0.04
CTNS-209ENST00000574776 MYO6Q9UM54 1294 aa15.3■□□□□ 0.04
CTNS-209ENST00000574776 ANKRD36A6QL64 1941 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 TTC24A2A3L6 582 aaPredicted RBP15.29■□□□□ 0.04
CTNS-209ENST00000574776 CFAP69A5D8W1 941 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 TMEM202A6NGA9 273 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 LRRC53A6NM62 1247 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 CDRT15L2A8MXV6 281 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 PRPSAP2O60256 369 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 POLR2LP62875 67 aaKnown RBP15.29■□□□□ 0.04
CTNS-209ENST00000574776 SKOR1P84550 965 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 RHDQ02161 417 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 CFHR1Q03591 330 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 IL10RBQ08334 325 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 VAC14Q08AM6 782 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 RALGDSQ12967 914 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 CYP4V2Q6ZWL3 525 aaPredicted RBP15.29■□□□□ 0.04
CTNS-209ENST00000574776 ZNF571Q7Z3V5 609 aaPredicted RBP15.29■□□□□ 0.04
CTNS-209ENST00000574776 B3GNT8Q7Z7M8 397 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 NPWQ8N729 165 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 OR1E3Q8WZA6 343 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 FUBP1Q96AE4 644 aaKnown RBP15.29■□□□□ 0.04
CTNS-209ENST00000574776 ECHDC3Q96DC8 303 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 CCDC97Q96F63 343 aaPredicted RBP15.29■□□□□ 0.04
CTNS-209ENST00000574776 PDXPQ96GD0 296 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 GFM1Q96RP9 751 aaKnown RBP15.29■□□□□ 0.04
CTNS-209ENST00000574776 RBM15Q96T37 977 aaKnown RBP eCLIP15.29■□□□□ 0.04
CTNS-209ENST00000574776 FOXP3Q9BZS1 431 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 MRPL40Q9NQ50 206 aaKnown RBP15.29■□□□□ 0.04
CTNS-209ENST00000574776 RTN4Q9NQC3 1192 aaKnown RBP15.29■□□□□ 0.04
CTNS-209ENST00000574776 CWC15Q9P013 229 aaKnown RBP15.29■□□□□ 0.04
CTNS-209ENST00000574776 CNOT8Q9UFF9 292 aaKnown RBP15.29■□□□□ 0.04
CTNS-209ENST00000574776 SSUH2Q9Y2M2 353 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 DGKBQ9Y6T7 804 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 ATMQ13315 3056 aa15.29■□□□□ 0.04
CTNS-209ENST00000574776 A0A1W2PQM1 296 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 ERVH48-1M5A8F1 160 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 CACNB4O00305 520 aaPredicted RBP15.28■□□□□ 0.04
CTNS-209ENST00000574776 RPLP0P05388 317 aaKnown RBP15.28■□□□□ 0.04
CTNS-209ENST00000574776 ELFN1P0C7U0 828 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 ANP32AP39687 249 aaKnown RBP15.28■□□□□ 0.04
CTNS-209ENST00000574776 HCAR3P49019 387 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 TYRO3Q06418 890 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 RFTN1Q14699 578 aaPredicted RBP15.28■□□□□ 0.04
CTNS-209ENST00000574776 ASIC2Q16515 512 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 CCDC183Q5T5S1 534 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 DPPA4Q7L190 304 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 TAF8Q7Z7C8 310 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 ZNF605Q86T29 641 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 SFTPA2Q8IWL1 248 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 FBXO39Q8N4B4 442 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 Q8N9G6 341 aaPredicted RBP15.28■□□□□ 0.04
CTNS-209ENST00000574776 FAM46DQ8NEK8 389 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 OR56A4Q8NGH8 313 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 LGR4Q9BXB1 951 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 LRRN3Q9H3W5 708 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 EPB41L5Q9HCM4 733 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 FGF22Q9HCT0 170 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 WDR70Q9NW82 654 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 AIPL1Q9NZN9 384 aa15.28■□□□□ 0.04
CTNS-209ENST00000574776 ZNF462Q96JM2 2506 aa15.27■□□□□ 0.04
CTNS-209ENST00000574776 LRP4O75096 1905 aa15.27■□□□□ 0.04
CTNS-209ENST00000574776 GOLGA6L22H0YM25 854 aa15.27■□□□□ 0.04
CTNS-209ENST00000574776 AGRPO00253 132 aa15.27■□□□□ 0.04
CTNS-209ENST00000574776 DDX3XO00571 662 aaKnown RBP eCLIP15.27■□□□□ 0.04
CTNS-209ENST00000574776 TRAFD1O14545 582 aaPredicted RBP15.27■□□□□ 0.04
CTNS-209ENST00000574776 LRCH4O75427 683 aa15.27■□□□□ 0.04
CTNS-209ENST00000574776 GZMAP12544 262 aa15.27■□□□□ 0.04
CTNS-209ENST00000574776 GM2AP17900 193 aa15.27■□□□□ 0.04
CTNS-209ENST00000574776 TRIM23P36406 574 aa15.27■□□□□ 0.04
CTNS-209ENST00000574776 RENBPP51606 427 aa15.27■□□□□ 0.04
CTNS-209ENST00000574776 INHBCP55103 352 aa15.27■□□□□ 0.04
CTNS-209ENST00000574776 KIAA1024LP59773 190 aa15.27■□□□□ 0.04
CTNS-209ENST00000574776 SLC10A7Q0GE19 358 aa15.27■□□□□ 0.04
CTNS-209ENST00000574776 CLN3Q13286 438 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms