RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 PNKPQ96T60 521 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 NEU1Q99519 415 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 SLC46A2Q9BY10 475 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 IMPG2Q9BZV3 1241 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 SIK2Q9H0K1 926 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 CLSTN2Q9H4D0 955 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 SMYD3Q9H7B4 428 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 ZNF703Q9H7S9 590 aaPredicted RBP5.03□□□□□ -1.6
PRPF8-211ENST00000574728 TRPV4Q9HBA0 871 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 GPR35Q9HC97 309 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 KLHL11Q9NVR0 708 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 GTF3C4Q9UKN8 822 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 CDH7Q9ULB5 785 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 SLC45A2Q9UMX9 530 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 COQ4Q9Y3A0 265 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 CHST2Q9Y4C5 530 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 SNX9Q9Y5X1 595 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 MYO10Q9HD67 2058 aa5.03□□□□□ -1.6
PRPF8-211ENST00000574728 DNAH14Q0VDD8 3507 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 SPTBN4Q9H254 2564 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 A0A1B0GTW7 788 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 GAGE12BA1L429 117 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 GAGE12HA6NDE8 117 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 TMEM221A6NGB7 291 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 PRSS29PA6NIE9 313 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 AHRRA9YTQ3 701 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 M0R296 226 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 RNASET2O00584 256 aaKnown RBP5.02□□□□□ -1.61
PRPF8-211ENST00000574728 ZNF185O15231 689 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 SLC16A3O15427 465 aaKnown RBP5.02□□□□□ -1.61
PRPF8-211ENST00000574728 FRS3O43559 492 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 CALUO43852 315 aaPredicted RBP5.02□□□□□ -1.61
PRPF8-211ENST00000574728 HUS1O60921 280 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 FAM20BO75063 409 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 NOL4O94818 638 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 HLA-DRAP01903 254 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 TNNC2P02585 160 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 KITP10721 976 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 GJA1P17302 382 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 PTPN2P17706 415 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 HDCP19113 662 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 TNNI1P19237 187 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 CCNE1P24864 410 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 PEX2P28328 305 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 ATICP31939 592 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 PSMC2P35998 433 aaKnown RBP5.02□□□□□ -1.61
PRPF8-211ENST00000574728 MAGEA11P43364 429 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 GCLMP48507 274 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 LHX1P48742 406 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 PGFP49763 221 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 VAMP7P51809 220 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 ZNF135P52742 658 aaPredicted RBP5.02□□□□□ -1.61
PRPF8-211ENST00000574728 AP3M2P53677 418 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 MXRA7P84157 204 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 LRRC63Q05C16 580 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 SIGLEC14Q08ET2 396 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 INCA1Q0VD86 236 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 TDGQ13569 410 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 SEMA5AQ13591 1074 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 HABP2Q14520 560 aaPredicted RBP5.02□□□□□ -1.61
PRPF8-211ENST00000574728 POLD3Q15054 466 aaPredicted RBP5.02□□□□□ -1.61
PRPF8-211ENST00000574728 CBWD6Q4V339 395 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 PDCD4Q53EL6 469 aaKnown RBP5.02□□□□□ -1.61
PRPF8-211ENST00000574728 CBWD3Q5JTY5 395 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 TMEM31Q5JXX7 168 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 CBWD5Q5RIA9 395 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 SDHAF4Q5VUM1 108 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 ISM2Q6H9L7 571 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 TANGO2Q6ICL3 276 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 RBM43Q6ZSC3 357 aaKnown RBP5.02□□□□□ -1.61
PRPF8-211ENST00000574728 INTS8Q75QN2 995 aaKnown RBP5.02□□□□□ -1.61
PRPF8-211ENST00000574728 GET4Q7L5D6 327 aaPredicted RBP5.02□□□□□ -1.61
PRPF8-211ENST00000574728 USP37Q86T82 979 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 FAM186BQ8IYM0 893 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 CRYBG2Q8N1P7 616 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 ZMIZ2Q8NF64 920 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 MYCBPAPQ8TBZ2 947 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 NOC3LQ8WTT2 800 aaKnown RBP5.02□□□□□ -1.61
PRPF8-211ENST00000574728 C2orf15Q8WU43 125 aaKnown RBP5.02□□□□□ -1.61
PRPF8-211ENST00000574728 ING5Q8WYH8 240 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 SMARCE1Q969G3 411 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 MYLPFQ96A32 169 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 CHFRQ96EP1 664 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 MARS2Q96GW9 593 aaKnown RBP5.02□□□□□ -1.61
PRPF8-211ENST00000574728 PCED1BQ96HM7 432 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 DHTKD1Q96HY7 919 aaPredicted RBP5.02□□□□□ -1.61
PRPF8-211ENST00000574728 ANKRD36BP1Q96IX9 119 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 MRGPRX1Q96LB2 322 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 PI4K2AQ9BTU6 479 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 DDX23Q9BUQ8 820 aaKnown RBP5.02□□□□□ -1.61
PRPF8-211ENST00000574728 C1QTNF1Q9BXJ1 281 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 ARNT2Q9HBZ2 717 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 SLC2A4RGQ9NR83 387 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 RMND1Q9NWS8 449 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 DDX43Q9NXZ2 648 aaKnown RBP5.02□□□□□ -1.61
PRPF8-211ENST00000574728 GDE1Q9NZC3 331 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 IL37Q9NZH6 218 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 IGSF9Q9P2J2 1179 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 DUSP12Q9UNI6 340 aa5.02□□□□□ -1.61
PRPF8-211ENST00000574728 CDYLQ9Y232 598 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms