RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 FCRL5Q96RD9 977 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 SRPK1Q96SB4 655 aaKnown RBP12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 FAM118BQ9BPY3 351 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 WRAP53Q9BUR4 548 aaKnown RBP12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 C1QTNF2Q9BXJ5 285 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 SMOC1Q9H4F8 434 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 EBF2Q9HAK2 575 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 CAPN10Q9HC96 672 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 PARD6AQ9NPB6 346 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 KCND1Q9NSA2 647 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 GGT7Q9UJ14 662 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 ZNF148Q9UQR1 794 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 CHKBQ9Y259 395 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 ITM2BQ9Y287 266 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 AAR2Q9Y312 384 aaKnown RBP12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 PPIL1Q9Y3C6 166 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 HS3ST3A1Q9Y663 406 aa12.83□□□□□ -0.36
TRAPPC1-206ENST00000573989 A0A0J9YYE9 177 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 TCRBV7S2A1N4TA0A589 114 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 C5orf60A6NFR6 353 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 USP27XA6NNY8 438 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 PATE3B3GLJ2 98 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 PSMD11O00231 422 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 CES2O00748 559 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 FPGTO14772 594 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 SPINT1O43278 529 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 FZD6O60353 706 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 TRBC1P01850 177 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 MMP2P08253 660 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 PRLRP16471 622 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 ZNF30P17039 623 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 NFKB1P19838 968 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 SDHBP21912 280 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 TGM1P22735 817 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 VIPR1P32241 457 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 CSNK1EP49674 416 aaKnown RBP12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 LIG3P49916 1009 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 GEMP55040 296 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 IRX4P78413 519 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 CDK18Q07002 472 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 SF3A2Q15428 464 aaKnown RBP12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 CCNG2Q16589 344 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 MFSD2AQ8NA29 543 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 LPCAT1Q8NF37 534 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 PIH1D2Q8WWB5 315 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 TRIM44Q96DX7 344 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 SLC6A18Q96N87 628 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 SPATA13Q96N96 652 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 MCCC1Q96RQ3 725 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 ORAI3Q9BRQ5 295 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 MLPHQ9BV36 600 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 EDEM2Q9BV94 578 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 FSD1LQ9BXM9 530 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 GBA3Q9H227 469 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 B4GALT6Q9UBX8 382 aa12.82□□□□□ -0.36
TRAPPC1-206ENST00000573989 GVINP1Q7Z2Y8 2422 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 LNP1A1A4G5 178 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 A6NNZ2 444 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 ANKRD66B4E2M5 251 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 PGRMC1O00264 195 aaKnown RBP12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 TOR1BO14657 336 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 VILLO15195 856 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 LIASO43766 372 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 DFNA5O60443 496 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 PMPCBO75439 489 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 CER1O95813 267 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 MT-CYBP00156 380 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 EPOP01588 193 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 ATP1A1P05023 1023 aaKnown RBP12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 PRKCGP05129 697 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 PDHA1P08559 390 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 C6P13671 934 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 ENGP17813 658 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 TCP1P17987 556 aaKnown RBP12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 ITIH2P19823 946 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 HOXD11P31277 338 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 CD68P34810 354 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 ACOX1Q15067 660 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 AGERQ15109 404 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 PCSK7Q16549 785 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 P3H1Q32P28 736 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 TCEAL6Q6IPX3 200 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 DRICH1Q6PGQ1 229 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 LIPIQ6XZB0 460 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 DCP2Q8IU60 420 aaKnown RBP12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 RASGEF1CQ8N431 466 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 CCDC89Q8N998 374 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 FAM71DQ8N9W8 422 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 TMEM145Q8NBT3 493 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 SPATA22Q8NHS9 363 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 CCHCR1Q8TD31 782 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 C1orf54Q8WWF1 131 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 TCEAL3Q969E4 200 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 TADA1Q96BN2 335 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 KLHDC7BQ96G42 594 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 OSBPL9Q96SU4 736 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 NAPGQ99747 312 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 TMEM121Q9BTD3 319 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 GTPBP2Q9BX10 602 aaKnown RBP12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 C10orf88Q9H8K7 445 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms