RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 TEX26Q8N6G2 289 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 TPCN2Q8NHX9 752 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 ZNF564Q8TBZ8 553 aaPredicted RBP17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 CPLX3Q8WVH0 158 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 GRAMD1AQ96CP6 724 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 NSMCE3Q96MG7 304 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 IL12RB2Q99665 862 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 APOOQ9BUR5 198 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 COQ6Q9Y2Z9 468 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 DGKBQ9Y6T7 804 aa17.18■□□□□ 0.34
MAP1LC3B-208ENST00000570189 CBFA2T2O43439 604 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 GM2AP17900 193 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 NFKBIAP25963 317 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 HTR1BP28222 390 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 HK3P52790 923 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 ZNF235Q14590 738 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 INPP5AQ14642 412 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 ELOCQ15369 112 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 HADHQ16836 314 aaKnown RBP17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 PRRT3Q5FWE3 981 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 SPECC1LQ69YQ0 1117 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 RBFAQ8N0V3 343 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 CBARPQ8N350 705 aaPredicted RBP17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 PGBD5Q8N414 524 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 ATPAF2Q8N5M1 289 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 SNIP1Q8TAD8 396 aaKnown RBP17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 LMX1AQ8TE12 382 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 GLMNQ92990 594 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 FAF2Q96CS3 445 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 BTBD6Q96KE9 485 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 DEPDC7Q96QD5 511 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 ZNF670Q9BS34 389 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 CLPBQ9H078 707 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 TCEAL2Q9H3H9 227 aaPredicted RBP17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 AMACRQ9UHK6 382 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 LHX6Q9UPM6 363 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 PPIL1Q9Y3C6 166 aa17.17■□□□□ 0.34
MAP1LC3B-208ENST00000570189 TNFRSF10CO14798 259 aa17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 DXOO77932 396 aaKnown RBP17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 RECQL5O94762 991 aaPredicted RBP17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 PROSCO94903 275 aa17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 ALPIP09923 528 aa17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 H2AFZP0C0S5 128 aa17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 ELFN1P0C7U0 828 aa17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 MAN1A1P33908 653 aa17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 RPIAP49247 311 aa17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 DPYSL3Q14195 570 aa17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 PAFAH1B3Q15102 231 aaKnown RBP17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 PDK2Q15119 407 aa17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 NFKBIBQ15653 356 aa17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 DEFB133Q30KQ1 61 aa17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 ESRP1Q6NXG1 681 aaKnown RBP17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 H2AFVQ71UI9 128 aa17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 OR8K1Q8NGG5 319 aa17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 WDR48Q8TAF3 677 aa17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 IFI44Q8TCB0 444 aa17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 NAT6Q93015 286 aa17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 COQ10AQ96MF6 247 aa17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 WDR92Q96MX6 357 aa17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 MCCC1Q96RQ3 725 aaPredicted RBP17.16■□□□□ 0.34
MAP1LC3B-208ENST00000570189 ZNF487B1APH4 448 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 PSMD11O00231 422 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 YY2O15391 372 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 TCEA3O75764 348 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 RASGRP1O95267 797 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 ANXA6P08133 673 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 TSHRP16473 764 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 CES1P23141 567 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 MMP13P45452 471 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 ADKP55263 362 aaKnown RBP17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 GALNT2Q10471 571 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 NR0B2Q15466 257 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 ALG11Q2TAA5 492 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 FAXCQ5TGI0 409 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 MARC1Q5VT66 337 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 IGF2-ASQ6U949 168 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 VSIG1Q86XK7 387 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 SLC35F3Q8IY50 421 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 NSMCE1Q8WV22 266 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 CTNNBL1Q8WYA6 563 aaPredicted RBP17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 MAML1Q92585 1016 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 TSGA13Q96PP4 275 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 RBM15Q96T37 977 aaKnown RBP eCLIP17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 NOD2Q9HC29 1040 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 PHTF1Q9UMS5 762 aa17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 ARHGEF17Q96PE2 2063 aaPredicted RBP17.15■□□□□ 0.34
MAP1LC3B-208ENST00000570189 LOC400499M0QZD8 3231 aa17.14■□□□□ 0.33
MAP1LC3B-208ENST00000570189 CACNA1GO43497 2377 aa17.14■□□□□ 0.33
MAP1LC3B-208ENST00000570189 KRT7P08729 469 aa17.14■□□□□ 0.33
MAP1LC3B-208ENST00000570189 TMEM253P0C7T8 217 aa17.14■□□□□ 0.33
MAP1LC3B-208ENST00000570189 KELP23276 732 aa17.14■□□□□ 0.33
MAP1LC3B-208ENST00000570189 TEAD1P28347 426 aa17.14■□□□□ 0.33
MAP1LC3B-208ENST00000570189 EIF2S3P41091 472 aaKnown RBP17.14■□□□□ 0.33
MAP1LC3B-208ENST00000570189 GARSP41250 739 aaKnown RBP17.14■□□□□ 0.33
MAP1LC3B-208ENST00000570189 SRP54P61011 504 aaKnown RBP17.14■□□□□ 0.33
MAP1LC3B-208ENST00000570189 KRT81Q14533 505 aa17.14■□□□□ 0.33
MAP1LC3B-208ENST00000570189 NCBP2-AS2Q69YL0 99 aa17.14■□□□□ 0.33
MAP1LC3B-208ENST00000570189 GUSBP11Q6P575 273 aa17.14■□□□□ 0.33
MAP1LC3B-208ENST00000570189 MAP7D3Q8IWC1 876 aa17.14■□□□□ 0.33
MAP1LC3B-208ENST00000570189 RAVER1Q8IY67 606 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms