RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 WDR92Q96MX6 357 aa22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 ZNF578Q96N58 590 aaPredicted RBP22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 CLPBQ9H078 707 aa22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 THAP2Q9H0W7 228 aa22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 KLQ9UEF7 1012 aa22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 PNMA8BQ9ULN7 279 aaPredicted RBP22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 PADI4Q9UM07 663 aa22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 CAPN11Q9UMQ6 739 aa22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 LUC7L2Q9Y383 392 aaKnown RBP22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 OR1A2Q9Y585 309 aa22.66■■□□□ 1.22
RBFOX1-219ENST00000569895 MYO1FO00160 1098 aa22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 CACNB4O00305 520 aaPredicted RBP22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 TRAFD1O14545 582 aaPredicted RBP22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 TCEA3O75764 348 aa22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 RECQL5O94762 991 aaPredicted RBP22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 PRKCGP05129 697 aa22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 RARAP10276 462 aa22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 TGM2P21980 687 aa22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 KELP23276 732 aa22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 PBX1P40424 430 aa22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 LSSP48449 732 aa22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 SLC10A7Q0GE19 358 aa22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 ISXQ2M1V0 245 aa22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 LIPIQ6XZB0 460 aa22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 DPPA4Q7L190 304 aa22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 SLC35F3Q8IY50 421 aa22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 CSPG4P5Q96PW8 444 aa22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 POLR1BQ9H9Y6 1135 aa22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 KCTD5Q9NXV2 234 aa22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 ANAPC7Q9UJX3 599 aa22.65■■□□□ 1.22
RBFOX1-219ENST00000569895 MPOP05164 745 aa22.64■■□□□ 1.21
RBFOX1-219ENST00000569895 GABREP78334 506 aa22.64■■□□□ 1.21
RBFOX1-219ENST00000569895 KRT81Q14533 505 aa22.64■■□□□ 1.21
RBFOX1-219ENST00000569895 HADHQ16836 314 aaKnown RBP22.64■■□□□ 1.21
RBFOX1-219ENST00000569895 ALG11Q2TAA5 492 aa22.64■■□□□ 1.21
RBFOX1-219ENST00000569895 RALGPS1Q5JS13 557 aa22.64■■□□□ 1.21
RBFOX1-219ENST00000569895 RBM44Q6ZP01 1051 aaKnown RBP22.64■■□□□ 1.21
RBFOX1-219ENST00000569895 LRRC49Q8IUZ0 686 aa22.64■■□□□ 1.21
RBFOX1-219ENST00000569895 ARL10Q8N8L6 244 aa22.64■■□□□ 1.21
RBFOX1-219ENST00000569895 SPOCK2Q92563 424 aa22.64■■□□□ 1.21
RBFOX1-219ENST00000569895 NUP85Q9BW27 656 aa22.64■■□□□ 1.21
RBFOX1-219ENST00000569895 GULP1Q9UBP9 304 aa22.64■■□□□ 1.21
RBFOX1-219ENST00000569895 PDE2AO00408 941 aaPredicted RBP22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 SOCS5O75159 536 aa22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 DXOO77932 396 aaKnown RBP22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 CYP1A2P05177 515 aa22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 TPM3P06753 285 aa22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 HOXC4P09017 264 aaPredicted RBP22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 PTMSP20962 102 aa22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 ITPKBP27987 946 aa22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 SSR1P43307 286 aaKnown RBP22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 CDH6P55285 790 aa22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 RALGDSQ12967 914 aa22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 MARC1Q5VT66 337 aa22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 ALKBH5Q6P6C2 394 aaKnown RBP22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 TP53INP2Q8IXH6 220 aa22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 ATPAF2Q8N5M1 289 aa22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 ZNF248Q8NDW4 579 aa22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 OR6C4Q8NGE1 309 aa22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 NUDCD1Q96RS6 583 aa22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 RCOR3Q9P2K3 495 aaPredicted RBP22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 GPR34Q9UPC5 381 aa22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 DGKBQ9Y6T7 804 aa22.63■■□□□ 1.21
RBFOX1-219ENST00000569895 EIF4E1BA6NMX2 242 aaKnown RBP22.62■■□□□ 1.21
RBFOX1-219ENST00000569895 HTRA2O43464 458 aaPredicted RBP22.62■■□□□ 1.21
RBFOX1-219ENST00000569895 MAFKO60675 156 aa22.62■■□□□ 1.21
RBFOX1-219ENST00000569895 HOXB3P14651 431 aaPredicted RBP22.62■■□□□ 1.21
RBFOX1-219ENST00000569895 TCF4P15884 667 aa22.62■■□□□ 1.21
RBFOX1-219ENST00000569895 PCBP4P57723 403 aaKnown RBP22.62■■□□□ 1.21
RBFOX1-219ENST00000569895 KIAA1024LP59773 190 aa22.62■■□□□ 1.21
RBFOX1-219ENST00000569895 ERVPABLB-1P60509 514 aa22.62■■□□□ 1.21
RBFOX1-219ENST00000569895 ACOX1Q15067 660 aa22.62■■□□□ 1.21
RBFOX1-219ENST00000569895 PERM1Q5SV97 790 aa22.62■■□□□ 1.21
RBFOX1-219ENST00000569895 CCDC122Q5T0U0 273 aa22.62■■□□□ 1.21
RBFOX1-219ENST00000569895 OR56A4Q8NGH8 313 aa22.62■■□□□ 1.21
RBFOX1-219ENST00000569895 PDCD6IPQ8WUM4 868 aaKnown RBP22.62■■□□□ 1.21
RBFOX1-219ENST00000569895 CCDC3Q9BQI4 270 aa22.62■■□□□ 1.21
RBFOX1-219ENST00000569895 PCDH18Q9HCL0 1135 aa22.62■■□□□ 1.21
RBFOX1-219ENST00000569895 ETNK2Q9NVF9 386 aa22.62■■□□□ 1.21
RBFOX1-219ENST00000569895 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.62■■□□□ 1.21
RBFOX1-219ENST00000569895 MYLKQ15746 1914 aa22.62■■□□□ 1.21
RBFOX1-219ENST00000569895 CACNA1GO43497 2377 aa22.61■■□□□ 1.21
RBFOX1-219ENST00000569895 A0A087X0T9 212 aa22.61■■□□□ 1.21
RBFOX1-219ENST00000569895 A8MX80 341 aa22.61■■□□□ 1.21
RBFOX1-219ENST00000569895 TNFRSF10CO14798 259 aa22.61■■□□□ 1.21
RBFOX1-219ENST00000569895 FAM228BP0C875 321 aa22.61■■□□□ 1.21
RBFOX1-219ENST00000569895 CYP2A6P11509 494 aaPredicted RBP22.61■■□□□ 1.21
RBFOX1-219ENST00000569895 RBMS1P29558 406 aaKnown RBP22.61■■□□□ 1.21
RBFOX1-219ENST00000569895 MMP13P45452 471 aa22.61■■□□□ 1.21
RBFOX1-219ENST00000569895 CCDC173Q0VFZ6 552 aa22.61■■□□□ 1.21
RBFOX1-219ENST00000569895 SPIDRQ14159 915 aa22.61■■□□□ 1.21
RBFOX1-219ENST00000569895 SOWAHCQ53LP3 525 aaPredicted RBP22.61■■□□□ 1.21
RBFOX1-219ENST00000569895 CRTC1Q6UUV9 634 aa22.61■■□□□ 1.21
RBFOX1-219ENST00000569895 PLA2G15Q8NCC3 412 aa22.61■■□□□ 1.21
RBFOX1-219ENST00000569895 PCDH19Q8TAB3 1148 aa22.61■■□□□ 1.21
RBFOX1-219ENST00000569895 BTBD6Q96KE9 485 aa22.61■■□□□ 1.21
RBFOX1-219ENST00000569895 RBM15Q96T37 977 aaKnown RBP eCLIP22.61■■□□□ 1.21
RBFOX1-219ENST00000569895 LGMNQ99538 433 aa22.61■■□□□ 1.21
RBFOX1-219ENST00000569895 MGME1Q9BQP7 344 aa22.61■■□□□ 1.21
RBFOX1-219ENST00000569895 THSD1Q9NS62 852 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms