RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 LSM7Q9UK45 103 aaKnown RBP6.34□□□□□ -1.39
LINC00556-201ENST00000569603 KLK13Q9UKR3 277 aa6.34□□□□□ -1.39
LINC00556-201ENST00000569603 TSPAN16Q9UKR8 245 aa6.34□□□□□ -1.39
LINC00556-201ENST00000569603 FLNCQ14315 2725 aa6.34□□□□□ -1.39
LINC00556-201ENST00000569603 COL6A6A6NMZ7 2263 aa6.34□□□□□ -1.39
LINC00556-201ENST00000569603 PLXNA2O75051 1894 aa6.34□□□□□ -1.39
LINC00556-201ENST00000569603 COL12A1Q99715 3063 aa6.34□□□□□ -1.4
LINC00556-201ENST00000569603 ADAMTS20P59510 1910 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 A0A0B4J203 849 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 TRIM49BA6NDI0 452 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 SRRM3A6NNA2 597 aaPredicted RBP6.33□□□□□ -1.4
LINC00556-201ENST00000569603 TMCO5BA8MYB1 307 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 RASA4O43374 803 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 LATS1O95835 1130 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 CFIP05156 583 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 ZNF883P0CG24 379 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 RALAP11233 206 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 SFTPCP11686 197 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 HSD3B1P14060 373 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 ATP6V1B1P15313 513 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 RPS2P15880 293 aaKnown RBP6.33□□□□□ -1.4
LINC00556-201ENST00000569603 LIG3P49916 1009 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 BCAT1P54687 386 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 DAOAP59103 153 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 SIM1P81133 766 aaPredicted RBP6.33□□□□□ -1.4
LINC00556-201ENST00000569603 GFPT1Q06210 699 aaPredicted RBP6.33□□□□□ -1.4
LINC00556-201ENST00000569603 EGR3Q06889 387 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 ADIGQ0VDE8 80 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 EIF4EBP2Q13542 120 aaPredicted RBP6.33□□□□□ -1.4
LINC00556-201ENST00000569603 GOLGA7BQ2TAP0 167 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 UAP1L1Q3KQV9 507 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 MINDY4Q4G0A6 757 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 MPP7Q5T2T1 576 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 ADGRF1Q5T601 910 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 CFAP58Q5T655 872 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 INTS11Q5TA45 600 aaKnown RBP6.33□□□□□ -1.4
LINC00556-201ENST00000569603 ZNF658Q5TYW1 1059 aaPredicted RBP6.33□□□□□ -1.4
LINC00556-201ENST00000569603 BSPRYQ5W0U4 402 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 SLC6A19Q695T7 634 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 NADSYN1Q6IA69 706 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 PMF1Q6P1K2 205 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 FIP1L1Q6UN15 594 aaKnown RBP6.33□□□□□ -1.4
LINC00556-201ENST00000569603 LCLAT1Q6UWP7 414 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 USP51Q70EK9 711 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 SRLQ86TD4 932 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 TADA2BQ86TJ2 420 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 MYLK4Q86YV6 388 aaPredicted RBP6.33□□□□□ -1.4
LINC00556-201ENST00000569603 TMPRSS6Q8IU80 811 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 SLC44A2Q8IWA5 706 aaPredicted RBP6.33□□□□□ -1.4
LINC00556-201ENST00000569603 ARHGAP18Q8N392 663 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 ARHGEF2Q92974 986 aaKnown RBP6.33□□□□□ -1.4
LINC00556-201ENST00000569603 KAT5Q92993 513 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 TTC17Q96AE7 1141 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 ERLEC1Q96DZ1 483 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 C20orf173Q96LM9 149 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 CAMK1GQ96NX5 476 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 GTPBP4Q9BZE4 634 aaKnown RBP6.33□□□□□ -1.4
LINC00556-201ENST00000569603 PCED1AQ9H1Q7 454 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 IL21RQ9HBE5 538 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 LUC7LQ9NQ29 371 aaKnown RBP6.33□□□□□ -1.4
LINC00556-201ENST00000569603 CNGB3Q9NQW8 809 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 RRN3Q9NYV6 651 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 PDP2Q9P2J9 529 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 DUSP13Q9UII6 198 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 RASAL2Q9UJF2 1139 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 CNTN6Q9UQ52 1028 aa6.33□□□□□ -1.4
LINC00556-201ENST00000569603 HBS1LQ9Y450 684 aaKnown RBP6.33□□□□□ -1.4
LINC00556-201ENST00000569603 COL5A1P20908 1838 aaPredicted RBP6.33□□□□□ -1.4
LINC00556-201ENST00000569603 DOCK4Q8N1I0 1966 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 CHD5Q8TDI0 1954 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 MYOCOSA0A1B0GUC4 107 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 SLC12A8A0AV02 714 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 CETN3O15182 167 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 MSI1O43347 362 aaKnown RBP6.32□□□□□ -1.4
LINC00556-201ENST00000569603 TSPAN3O60637 253 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 OPHN1O60890 802 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 MTRF1O75570 445 aaKnown RBP6.32□□□□□ -1.4
LINC00556-201ENST00000569603 IGLV3-25P01717 112 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 HMBSP08397 361 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 MMEP08473 750 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 PAEPP09466 180 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 EPB41P11171 864 aaKnown RBP6.32□□□□□ -1.4
LINC00556-201ENST00000569603 HLA-EP13747 358 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 TFE3P19532 575 aaPredicted RBP6.32□□□□□ -1.4
LINC00556-201ENST00000569603 HOXA5P20719 270 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 OXTRP30559 389 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 SLC6A4P31645 630 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 FMO5P49326 533 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 ZNF445P59923 1031 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 FKBP3Q00688 224 aaKnown RBP6.32□□□□□ -1.4
LINC00556-201ENST00000569603 LRRC63Q05C16 580 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 BST2Q10589 180 aaKnown RBP6.32□□□□□ -1.4
LINC00556-201ENST00000569603 TRIM14Q14142 442 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 GBX1Q14549 363 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 PDCD2Q16342 344 aaPredicted RBP6.32□□□□□ -1.4
LINC00556-201ENST00000569603 KCNT1Q5JUK3 1230 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 PIK3R6Q5UE93 754 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 NUGGCQ68CJ6 796 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 TTI2Q6NXR4 508 aa6.32□□□□□ -1.4
LINC00556-201ENST00000569603 BEND5Q7L4P6 421 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms