RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 NOL7Q9UMY1 257 aaKnown RBP6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 CYP46A1Q9Y6A2 500 aa6.65□□□□□ -1.34
HERPUD1-217ENST00000569429 NUP210LQ5VU65 1888 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 TCAF2A6NFQ2 919 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 K7ELQ4 463 aaPredicted RBP6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 TNFRSF10CO14798 259 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 AREL1O15033 823 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 KLHL41O60662 606 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 PHACTR2O75167 634 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 JRKO75564 520 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 CLDN14O95500 239 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 TACR2P21452 398 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 CA7P43166 264 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 TSFMP43897 325 aaKnown RBP6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 TOB1P50616 345 aaPredicted RBP6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 CLCN6P51797 869 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 CASP5P51878 434 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 RRADP55042 308 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 RPS18P62269 152 aaKnown RBP6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 RPS15P62841 145 aaKnown RBP6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 CYP24A1Q07973 514 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 NCOA4Q13772 614 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 PCOLCEQ15113 449 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 LLGL1Q15334 1064 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 CEBPEQ15744 281 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 SNRNP35Q16560 246 aaKnown RBP6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 KLHL40Q2TBA0 621 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 TTC39BQ5VTQ0 682 aaPredicted RBP6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 FCRL6Q6DN72 434 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 MEX3BQ6ZN04 569 aaKnown RBP6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 ZADH2Q8N4Q0 377 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 ARFGAP1Q8N6T3 406 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 ATP11CQ8NB49 1132 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 OR56A4Q8NGH8 313 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 OR52K2Q8NGK3 314 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 TMC2Q8TDI7 906 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 OR1E3Q8WZA6 343 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 TM9SF4Q92544 642 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 NRGNQ92686 78 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 RAD54LQ92698 747 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 CCDC127Q96BQ5 260 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 SLC39A13Q96H72 371 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 AHCYL2Q96HN2 611 aaKnown RBP6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 RUFY1Q96T51 708 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 PDE7BQ9NP56 450 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 OLFML3Q9NRN5 406 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 ARHGEF38Q9NXL2 777 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 ZNHIT2Q9UHR6 403 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 FARSAQ9Y285 508 aaKnown RBP6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 ITM2BQ9Y287 266 aa6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 HRNRQ86YZ3 2850 aaPredicted RBP6.64□□□□□ -1.35
HERPUD1-217ENST00000569429 TRGV8A0A0C4DH27 118 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 K7ERQ8 282 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 SPTLC2O15270 562 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 SMAD6O43541 496 aaKnown RBP6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 DNAJC13O75165 2243 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 ZNF821O75541 412 aaPredicted RBP6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 IPO13O94829 963 aaKnown RBP6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 LY6G6DO95868 133 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 ALPPP05187 535 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 PLEKP08567 350 aaPredicted RBP6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 ANKRD34CP0C6C1 535 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 CCNB1P14635 433 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 GAP43P17677 238 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 ASPAP45381 313 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 SMSP52788 366 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 ADORA2A-AS1P86434 159 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 INPP5AQ14642 412 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 LRRC14Q15048 493 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 CDSNQ15517 529 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 SGSM1Q2NKQ1 1148 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 TSR1Q2NL82 804 aaKnown RBP6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.63□□□□□ -1.355e-6■■□□□ 11.7
HERPUD1-217ENST00000569429 WSCD2Q2TBF2 565 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 RAP1GAP2Q684P5 730 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 HGSNATQ68CP4 663 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 ANKRD40Q6AI12 368 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 PLEKHA7Q6IQ23 1121 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 C22orf39Q6P5X5 142 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 NRROSQ86YC3 692 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 RASGRP3Q8IV61 690 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 OR10G6Q8NH81 332 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 COG1Q8WTW3 980 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 ELMO3Q96BJ8 720 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 CALML4Q96GE6 196 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 HEPHQ9BQS7 1158 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 TM6SF1Q9BZW5 370 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 ZMYND15Q9H091 742 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 ZNF552Q9H707 407 aaPredicted RBP6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 FGF22Q9HCT0 170 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 XPO7Q9UIA9 1087 aaKnown RBP6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 LNPEPQ9UIQ6 1025 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 VPS28Q9UK41 221 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 AJAP1Q9UKB5 411 aaPredicted RBP6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 TLR6Q9Y2C9 796 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 PLEKHM1Q9Y4G2 1056 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 OR1A2Q9Y585 309 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 MEGF8Q7Z7M0 2845 aa6.63□□□□□ -1.35
HERPUD1-217ENST00000569429 ABCA1O95477 2261 aa6.62□□□□□ -1.35
HERPUD1-217ENST00000569429 NBEAL2Q6ZNJ1 2754 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms