RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 TWNKQ96RR1 684 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 S100A13Q99584 98 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 SLC30A2Q9BRI3 323 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 DSN1Q9H410 356 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 CHST12Q9NRB3 414 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 SAMHD1Q9Y3Z3 626 aaKnown RBP7.14□□□□□ -1.27
CNOT1-216ENST00000569240 LYVE1Q9Y5Y7 322 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 SPACA6W5XKT8 324 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 AZIN1O14977 448 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 CRTAPO75718 401 aaPredicted RBP7.14□□□□□ -1.27
CNOT1-216ENST00000569240 SLC22A3O75751 556 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 KDELR1P24390 212 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 PKLRP30613 574 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 MAZP56270 477 aaKnown RBP7.14□□□□□ -1.27
CNOT1-216ENST00000569240 RAB10P61026 200 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 VSTM1Q6UX27 236 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 ZYG11AQ6WRX3 759 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 OR10T2Q8NGX3 314 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 SLC7A14Q8TBB6 771 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 KAT2AQ92830 837 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 VPS35Q96QK1 796 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 PFDN5Q99471 154 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 ADGRE3Q9BY15 652 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 WASF2Q9Y6W5 498 aa7.14□□□□□ -1.27
CNOT1-216ENST00000569240 C10orf71Q711Q0 1435 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 TCRBV9S1A1TA0A576 114 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 PDCD5O14737 125 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 WDPCPO95876 746 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 RFX5P48382 616 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 NAGLUP54802 743 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 HNRNPDQ14103 355 aaKnown RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 CSHL1Q14406 222 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 EPHA10Q5JZY3 1008 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 HACD4Q5VWC8 232 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 IRF2BP2Q7Z5L9 587 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 METTL6Q8TCB7 284 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 NR4A3Q92570 626 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 ZNF486Q96H40 463 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 CIB1Q99828 191 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 DCSTAMPQ9H295 470 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 CRISPLD1Q9H336 500 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 POMKQ9H5K3 350 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 SARS2Q9NP81 518 aaKnown RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 KLHL1Q9NR64 748 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 ZDHHC18Q9NUE0 388 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 NFKBIL1Q9UBC1 381 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 NR2E1Q9Y466 385 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 AK9Q5TCS8 1911 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 PTPRJQ12913 1337 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 PRAMEF33A0A0G2JMD5 474 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 CASKO14936 926 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 TBX1O43435 398 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 PRAMEF10O60809 474 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 RASGRP1O95267 797 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 TRIM40Q6P9F5 258 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 CATSPER4Q7RTX7 472 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 ALYREFQ86V81 257 aaKnown RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 PHC2Q8IXK0 858 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 OR52L1Q8NGH7 329 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 TCTEX1D2Q8WW35 142 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 LPAR1Q92633 364 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 TRPS1Q9UHF7 1281 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 PRR12Q9ULL5 1215 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 MGAT4AQ9UM21 535 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 SLC9A8Q9Y2E8 581 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 RPL36Q9Y3U8 105 aaKnown RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 PCDHGB1Q9Y5G3 927 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 hCG_1818297A0A087WSY0 165 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 KANTRA0A1W2PQU2 76 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 CLCA1A8K7I4 914 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 ACOX3O15254 700 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 KLRC4O43908 158 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 RPS17P08708 135 aaKnown RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 HOXC6P09630 235 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 MATN1P21941 496 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 ENTPD1P49961 510 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 UBAP2LQ14157 1087 aaKnown RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 TEAD4Q15561 434 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 WSCD2Q2TBF2 565 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 SYTL3Q4VX76 610 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 OGFRL1Q5TC84 451 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 HACD2Q6Y1H2 254 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 SLC22A16Q86VW1 577 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 MFSD2AQ8NA29 543 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 SRFBP1Q8NEF9 429 aaKnown RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 IPMKQ8NFU5 416 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 USP29Q9HBJ7 922 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 LRRC4CQ9HCJ2 640 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 TJP2Q9UDY2 1190 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 SNX6Q9UNH7 406 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 DHRS7Q9Y394 339 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 BICRAQ9NZM4 1560 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 FAM205CA6NFA0 338 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 OR6C70A6NIJ9 312 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 DHX15O43143 795 aaKnown RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 PRKYO43930 277 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 SLC2A4P14672 509 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 CES1P23141 567 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 ANKDD1AQ495B1 522 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 SIPA1Q96FS4 1042 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms