RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 NSUN2Q08J23 767 aaKnown RBP eCLIP13.74□□□□□ -0.21
CNOT1-215ENST00000569020 EIF3IQ13347 325 aaKnown RBP13.74□□□□□ -0.21
CNOT1-215ENST00000569020 MAMLD1Q13495 774 aa13.74□□□□□ -0.21
CNOT1-215ENST00000569020 RFTN1Q14699 578 aaPredicted RBP13.74□□□□□ -0.21
CNOT1-215ENST00000569020 TCEA2Q15560 299 aa13.74□□□□□ -0.21
CNOT1-215ENST00000569020 RFX8Q6ZV50 586 aa13.74□□□□□ -0.21
CNOT1-215ENST00000569020 CLEC14AQ86T13 490 aa13.74□□□□□ -0.21
CNOT1-215ENST00000569020 KYQ8NBH2 561 aa13.74□□□□□ -0.21
CNOT1-215ENST00000569020 TSEN2Q8NCE0 465 aaKnown RBP13.74□□□□□ -0.21
CNOT1-215ENST00000569020 SNRNP25Q9BV90 132 aaKnown RBP13.74□□□□□ -0.21
CNOT1-215ENST00000569020 STRADBQ9C0K7 418 aa13.74□□□□□ -0.21
CNOT1-215ENST00000569020 TAS2R14Q9NYV8 317 aa13.74□□□□□ -0.21
CNOT1-215ENST00000569020 PCSK1NQ9UHG2 260 aa13.74□□□□□ -0.21
CNOT1-215ENST00000569020 MYO6Q9UM54 1294 aa13.74□□□□□ -0.21
CNOT1-215ENST00000569020 SSUH2Q9Y2M2 353 aa13.74□□□□□ -0.21
CNOT1-215ENST00000569020 SCN8AQ9UQD0 1980 aa13.74□□□□□ -0.21
CNOT1-215ENST00000569020 DFFAO00273 331 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 CASC3O15234 703 aaKnown RBP13.73□□□□□ -0.21
CNOT1-215ENST00000569020 PRPSAP2O60256 369 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 RECQL5O94762 991 aaPredicted RBP13.73□□□□□ -0.21
CNOT1-215ENST00000569020 RPLP0P05388 317 aaKnown RBP13.73□□□□□ -0.21
CNOT1-215ENST00000569020 ELFN1P0C7U0 828 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 ERCC2P18074 760 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 RENBPP51606 427 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 KIAA1024LP59773 190 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 IL10RBQ08334 325 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 NCAPHQ15003 741 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 CA9Q16790 459 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 PPP6R3Q5H9R7 873 aaPredicted RBP13.73□□□□□ -0.21
CNOT1-215ENST00000569020 PLEKHA7Q6IQ23 1121 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 CCDC81Q6ZN84 652 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 APTXQ7Z2E3 356 aaKnown RBP13.73□□□□□ -0.21
CNOT1-215ENST00000569020 IRF2BP2Q7Z5L9 587 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 ZSWIM9Q86XI8 627 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 PLA2G15Q8NCC3 412 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 OR56A4Q8NGH8 313 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 SNRNP27Q8WVK2 155 aaKnown RBP13.73□□□□□ -0.21
CNOT1-215ENST00000569020 ECHDC3Q96DC8 303 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 PDXPQ96GD0 296 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 TMEM74Q96NL1 305 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 RBM15Q96T37 977 aaKnown RBP eCLIP13.73□□□□□ -0.21
CNOT1-215ENST00000569020 EPB41L5Q9HCM4 733 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 RABGEF1Q9UJ41 708 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 DGKBQ9Y6T7 804 aa13.73□□□□□ -0.21
CNOT1-215ENST00000569020 PMS2P1A4D2B8 440 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 D6RAR5 112 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 GOLGA6L22H0YM25 854 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 K7ENP7 123 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 PLD2O14939 933 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 ATMINO43313 823 aaPredicted RBP13.72□□□□□ -0.21
CNOT1-215ENST00000569020 SCNN1BP51168 640 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 ZNF135P52742 658 aaPredicted RBP13.72□□□□□ -0.21
CNOT1-215ENST00000569020 INHBCP55103 352 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 CCL7P80098 99 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 RALGDSQ12967 914 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 ZSCAN23Q3MJ62 389 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 AFMIDQ63HM1 303 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 INO80CQ6PI98 192 aaPredicted RBP13.72□□□□□ -0.21
CNOT1-215ENST00000569020 LIPIQ6XZB0 460 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 RAB11FIP2Q7L804 512 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 TAF8Q7Z7C8 310 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 PSTKQ8IV42 348 aaKnown RBP13.72□□□□□ -0.21
CNOT1-215ENST00000569020 ARHGAP12Q8IWW6 846 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 FBXO39Q8N4B4 442 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 GPR156Q8NFN8 814 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 FNIP1Q8TF40 1166 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 FUBP1Q96AE4 644 aaKnown RBP13.72□□□□□ -0.21
CNOT1-215ENST00000569020 PEBP4Q96S96 227 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 KCTD15Q96SI1 283 aaPredicted RBP13.72□□□□□ -0.21
CNOT1-215ENST00000569020 SYT11Q9BT88 431 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.72□□□□□ -0.21
CNOT1-215ENST00000569020 HSD3B7Q9H2F3 369 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 LRRN3Q9H3W5 708 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 WDR70Q9NW82 654 aa13.72□□□□□ -0.21
CNOT1-215ENST00000569020 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.71□□□□□ -0.21
CNOT1-215ENST00000569020 A0A1W2PQ67 120 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 A0A1W2PQM1 296 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 TMEM202A6NGA9 273 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 TMEM191CA6NGB0 347 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 LRRC53A6NM62 1247 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 PDE2AO00408 941 aaPredicted RBP13.71□□□□□ -0.21
CNOT1-215ENST00000569020 TNFRSF10CO14798 259 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 ATP1A3P13637 1013 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 PLA2G2AP14555 144 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 PNLIPP16233 465 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 GLB1P16278 677 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 NFKBIAP25963 317 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 MIPP30301 263 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 CCKBRP32239 447 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 HCAR3P49019 387 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 AP1S1P61966 158 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 CLN3Q13286 438 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 LBRQ14739 615 aaKnown RBP13.71□□□□□ -0.21
CNOT1-215ENST00000569020 ACOX1Q15067 660 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 TSR1Q2NL82 804 aaKnown RBP13.71□□□□□ -0.21
CNOT1-215ENST00000569020 ARHGAP36Q6ZRI8 547 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 NYAP1Q6ZVC0 841 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 DPPA4Q7L190 304 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 B3GNT8Q7Z7M8 397 aa13.71□□□□□ -0.21
CNOT1-215ENST00000569020 LZTR1Q8N653 840 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms