RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 FAM72CH0Y354 149 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 BIN1O00499 593 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 TNFRSF10CO14798 259 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 ZW10O43264 779 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 PIGNO95427 931 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 LSM8O95777 96 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 LIFP15018 202 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 CYP11B1P15538 503 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 ARSDP51689 593 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 B4GALNT1Q00973 533 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 GRM3Q14832 879 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 IGFBP7Q16270 282 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 CDO1Q16878 200 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 AMZ1Q400G9 498 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 C2CD6Q53TS8 623 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 FAM72AQ5TYM5 149 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 FAM72DQ6L9T8 149 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 BRAT1Q6PJG6 821 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 ZNF438Q7Z4V0 828 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 FAM72BQ86X60 149 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 FAM26EQ8N5C1 309 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 RCBTB1Q8NDN9 531 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 CCDC112Q8NEF3 446 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 C9orf43Q8TAL5 461 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 FUBP1Q96AE4 644 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 NUDT22Q9BRQ3 303 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 TMEM168Q9H0V1 697 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 SIX2Q9NPC8 291 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 MRPL40Q9NQ50 206 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 METTL5Q9NRN9 209 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 MAN2B2Q9Y2E5 1009 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 ATP8A1Q9Y2Q0 1164 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 DAAM1Q9Y4D1 1078 aa11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 SPTBN1Q01082 2364 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 SPENQ96T58 3664 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-209ENST00000568569 IGHV5-10-1A0A0J9YXX1 117 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 CFAP69A5D8W1 941 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 RHPN2P1A8MT19 583 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 ZNF891A8MT65 544 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 INSIG1O15503 277 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 B4GAT1O43505 415 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 PLEKP08567 350 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 HOXC4P09017 264 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 FGF3P11487 239 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 ALDH4A1P30038 563 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 SDC4P31431 198 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 UGT1A3P35503 534 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 MMP12P39900 470 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 OR1D5P58170 312 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 TRA2AQ13595 282 aaKnown RBP eCLIP11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 NCAPHQ15003 741 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 TSR1Q2NL82 804 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 DNAAF5Q86Y56 855 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 CACNA2D3Q8IZS8 1091 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 EMC1Q8N766 993 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 RTL3Q8N8U3 475 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 NETO2Q8NC67 525 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 PLA2G15Q8NCC3 412 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 EXOC2Q96KP1 924 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 CCDC74BQ96LY2 380 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 ZNF641Q96N77 438 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 DDA1Q9BW61 102 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 SUV39H2Q9H5I1 410 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 CYP4F12Q9HCS2 524 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 LHX3Q9UBR4 397 aa11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 USP9XQ93008 2570 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-209ENST00000568569 CAPN5O15484 640 aaPredicted RBP11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 RECQL5O94762 991 aaPredicted RBP11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 CSTF2P33240 577 aaKnown RBP eCLIP11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 STAT1P42224 750 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 GPR3P46089 330 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 MAZP56270 477 aaKnown RBP11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 BIRC2Q13490 618 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 RAPGEF1Q13905 1077 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 NR1D2Q14995 579 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 C15orf59Q2T9L4 293 aaPredicted RBP11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 PARP15Q460N3 678 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 C4orf17Q53FE4 359 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 RAB6CQ53S08 254 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 TAF3Q5VWG9 929 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 STRADAQ7RTN6 431 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 C17orf82Q86X59 251 aaPredicted RBP11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 AGBL5Q8NDL9 886 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 CCL4L1Q8NHW4 92 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 ART4Q93070 314 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 PMEPA1Q969W9 287 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 PSMG3-AS1Q96PY0 264 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 TUBGCP5Q96RT8 1024 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 ASPSCR1Q9BZE9 553 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 KLC2Q9H0B6 622 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 RAB6CQ9H0N0 254 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 NOL6Q9H6R4 1146 aaKnown RBP11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 WDR26Q9H7D7 661 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 RWDD2AQ9UIY3 292 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 MOSPD1Q9UJG1 213 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 B3GALT1Q9Y5Z6 326 aa11.85□□□□□ -0.51
GTF3C1-209ENST00000568569 PRSS38A1L453 326 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 PDE2AO00408 941 aaPredicted RBP11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 RAD1O60671 282 aa11.84□□□□□ -0.51
GTF3C1-209ENST00000568569 PRKCGP05129 697 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms