RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 CSPG4P5Q96PW8 444 aa19.01■□□□□ 0.63
SPSB3-210ENST00000568416 ETNK2Q9NVF9 386 aa19.01■□□□□ 0.63
SPSB3-210ENST00000568416 KLQ9UEF7 1012 aa19.01■□□□□ 0.63
SPSB3-210ENST00000568416 PADI4Q9UM07 663 aa19.01■□□□□ 0.63
SPSB3-210ENST00000568416 ENTPD2Q9Y5L3 495 aa19.01■□□□□ 0.63
SPSB3-210ENST00000568416 RAI2Q9Y5P3 530 aa19.01■□□□□ 0.63
SPSB3-210ENST00000568416 BZW2Q9Y6E2 419 aaKnown RBP19.01■□□□□ 0.63
SPSB3-210ENST00000568416 GOLGA4Q13439 2230 aaKnown RBP19■□□□□ 0.63
SPSB3-210ENST00000568416 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19■□□□□ 0.63
SPSB3-210ENST00000568416 TCEA3O75764 348 aa19■□□□□ 0.63
SPSB3-210ENST00000568416 ELFN1P0C7U0 828 aa19■□□□□ 0.63
SPSB3-210ENST00000568416 CTSEP14091 401 aa19■□□□□ 0.63
SPSB3-210ENST00000568416 CR2P20023 1033 aa19■□□□□ 0.63
SPSB3-210ENST00000568416 SRP54P61011 504 aaKnown RBP19■□□□□ 0.63
SPSB3-210ENST00000568416 PIGHQ14442 188 aaPredicted RBP19■□□□□ 0.63
SPSB3-210ENST00000568416 KCTD16Q68DU8 428 aa19■□□□□ 0.63
SPSB3-210ENST00000568416 TMCO3Q6UWJ1 677 aa19■□□□□ 0.63
SPSB3-210ENST00000568416 LUZP1Q86V48 1076 aa19■□□□□ 0.63
SPSB3-210ENST00000568416 ARL10Q8N8L6 244 aa19■□□□□ 0.63
SPSB3-210ENST00000568416 NIPA2Q8N8Q9 360 aa19■□□□□ 0.63
SPSB3-210ENST00000568416 TEKT4Q8WW24 435 aa19■□□□□ 0.63
SPSB3-210ENST00000568416 HIC2Q96JB3 615 aa19■□□□□ 0.63
SPSB3-210ENST00000568416 WDR92Q96MX6 357 aa19■□□□□ 0.63
SPSB3-210ENST00000568416 CCDC3Q9BQI4 270 aa19■□□□□ 0.63
SPSB3-210ENST00000568416 THAP2Q9H0W7 228 aa19■□□□□ 0.63
SPSB3-210ENST00000568416 STAU2Q9NUL3 570 aaKnown RBP eCLIP19■□□□□ 0.63
SPSB3-210ENST00000568416 DOLKQ9UPQ8 538 aa19■□□□□ 0.63
SPSB3-210ENST00000568416 COL27A1Q8IZC6 1860 aaPredicted RBP19■□□□□ 0.63
SPSB3-210ENST00000568416 ANKRD11Q6UB99 2663 aaPredicted RBP19■□□□□ 0.63
SPSB3-210ENST00000568416 DSPP15924 2871 aaKnown RBP19■□□□□ 0.63
SPSB3-210ENST00000568416 ITPR1Q14643 2758 aa18.99■□□□□ 0.63
SPSB3-210ENST00000568416 A0A1W2PNU3 283 aaPredicted RBP18.99■□□□□ 0.63
SPSB3-210ENST00000568416 SYCE3A1L190 88 aa18.99■□□□□ 0.63
SPSB3-210ENST00000568416 TTC24A2A3L6 582 aaPredicted RBP18.99■□□□□ 0.63
SPSB3-210ENST00000568416 CASC3O15234 703 aaKnown RBP18.99■□□□□ 0.63
SPSB3-210ENST00000568416 HTRA2O43464 458 aaPredicted RBP18.99■□□□□ 0.63
SPSB3-210ENST00000568416 MAFKO60675 156 aa18.99■□□□□ 0.63
SPSB3-210ENST00000568416 SERPING1P05155 500 aa18.99■□□□□ 0.63
SPSB3-210ENST00000568416 HSPA9P38646 679 aaKnown RBP18.99■□□□□ 0.63
SPSB3-210ENST00000568416 KIAA1024LP59773 190 aa18.99■□□□□ 0.63
SPSB3-210ENST00000568416 ERVPABLB-1P60509 514 aa18.99■□□□□ 0.63
SPSB3-210ENST00000568416 CCDC173Q0VFZ6 552 aa18.99■□□□□ 0.63
SPSB3-210ENST00000568416 ZNF235Q14590 738 aa18.99■□□□□ 0.63
SPSB3-210ENST00000568416 IGF2-ASQ6U949 168 aa18.99■□□□□ 0.63
SPSB3-210ENST00000568416 RBM44Q6ZP01 1051 aaKnown RBP18.99■□□□□ 0.63
SPSB3-210ENST00000568416 RD3Q7Z3Z2 195 aa18.99■□□□□ 0.63
SPSB3-210ENST00000568416 GKN2Q86XP6 184 aa18.99■□□□□ 0.63
SPSB3-210ENST00000568416 PGBD5Q8N414 524 aa18.99■□□□□ 0.63
SPSB3-210ENST00000568416 ZNF248Q8NDW4 579 aa18.99■□□□□ 0.63
SPSB3-210ENST00000568416 PCDH19Q8TAB3 1148 aa18.99■□□□□ 0.63
SPSB3-210ENST00000568416 WDR48Q8TAF3 677 aa18.99■□□□□ 0.63
SPSB3-210ENST00000568416 SCG3Q8WXD2 468 aaKnown RBP18.99■□□□□ 0.63
SPSB3-210ENST00000568416 FUBP1Q96AE4 644 aaKnown RBP18.99■□□□□ 0.63
SPSB3-210ENST00000568416 PDXPQ96GD0 296 aa18.99■□□□□ 0.63
SPSB3-210ENST00000568416 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.99■□□□□ 0.63
SPSB3-210ENST00000568416 PCDH18Q9HCL0 1135 aa18.99■□□□□ 0.63
SPSB3-210ENST00000568416 ASCL3Q9NQ33 180 aa18.99■□□□□ 0.63
SPSB3-210ENST00000568416 DGKBQ9Y6T7 804 aa18.99■□□□□ 0.63
SPSB3-210ENST00000568416 TDRD6O60522 2096 aaKnown RBP18.99■□□□□ 0.63
SPSB3-210ENST00000568416 A0A1W2PQ67 120 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 SOCS5O75159 536 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 TNFP01375 233 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 HOXC4P09017 264 aaPredicted RBP18.98■□□□□ 0.63
SPSB3-210ENST00000568416 TRIM23P36406 574 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 UBASH3AP57075 661 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 PCBP4P57723 403 aaKnown RBP18.98■□□□□ 0.63
SPSB3-210ENST00000568416 TPM4P67936 248 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 ZBED6P86452 979 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 SLC25A11Q02978 314 aaKnown RBP18.98■□□□□ 0.63
SPSB3-210ENST00000568416 TLE3Q04726 772 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 SPACA3Q8IXA5 215 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 PAF1Q8N7H5 531 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 KYQ8NBH2 561 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 OR56A4Q8NGH8 313 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 OR1E3Q8WZA6 343 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 ATXN7L3BQ96GX2 97 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 BTBD6Q96KE9 485 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 COQ10AQ96MF6 247 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 NUDCD1Q96RS6 583 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 UBL7Q96S82 380 aaPredicted RBP18.98■□□□□ 0.63
SPSB3-210ENST00000568416 RBM15Q96T37 977 aaKnown RBP eCLIP18.98■□□□□ 0.63
SPSB3-210ENST00000568416 MGME1Q9BQP7 344 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 GULP1Q9UBP9 304 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 B4GALT6Q9UBX8 382 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 IP6K2Q9UHH9 426 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 CAPN11Q9UMQ6 739 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 SATB2Q9UPW6 733 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 PCDHGC4Q9Y5F7 938 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 CACNA1GO43497 2377 aa18.98■□□□□ 0.63
SPSB3-210ENST00000568416 ZFYVE26Q68DK2 2539 aa18.97■□□□□ 0.63
SPSB3-210ENST00000568416 URB1O60287 2271 aaKnown RBP18.97■□□□□ 0.63
SPSB3-210ENST00000568416 A0A087X0T9 212 aa18.97■□□□□ 0.63
SPSB3-210ENST00000568416 TMEM202A6NGA9 273 aa18.97■□□□□ 0.63
SPSB3-210ENST00000568416 A8MX80 341 aa18.97■□□□□ 0.63
SPSB3-210ENST00000568416 CACNB4O00305 520 aaPredicted RBP18.97■□□□□ 0.63
SPSB3-210ENST00000568416 NTN3O00634 580 aaPredicted RBP18.97■□□□□ 0.63
SPSB3-210ENST00000568416 CYP1A2P05177 515 aa18.97■□□□□ 0.63
SPSB3-210ENST00000568416 FAM228BP0C875 321 aa18.97■□□□□ 0.63
SPSB3-210ENST00000568416 PDX1P52945 283 aa18.97■□□□□ 0.63
SPSB3-210ENST00000568416 TCEA2Q15560 299 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms