RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 SLC45A4Q5BKX6 768 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 ARMC12Q5T9G4 340 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 ERAP2Q6P179 960 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 LIPIQ6XZB0 460 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 GCNT7Q6ZNI0 430 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 PID1Q7Z2X4 250 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 SPATS2Q86XZ4 545 aaKnown RBP13.08□□□□□ -0.32
CNOT1-213ENST00000568158 REXO1L1PQ8IX06 675 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 TMEM145Q8NBT3 493 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 ASB12Q8WXK4 309 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 KLHDC7BQ96G42 594 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 LENG8Q96PV6 779 aaPredicted RBP13.08□□□□□ -0.32
CNOT1-213ENST00000568158 RBM15Q96T37 977 aaKnown RBP eCLIP13.08□□□□□ -0.32
CNOT1-213ENST00000568158 ZDHHC5Q9C0B5 715 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 CAAP1Q9H8G2 361 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 GLOD4Q9HC38 313 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 MBNL1Q9NR56 388 aaKnown RBP13.08□□□□□ -0.32
CNOT1-213ENST00000568158 B4GALT6Q9UBX8 382 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 PHTF1Q9UMS5 762 aa13.08□□□□□ -0.32
CNOT1-213ENST00000568158 A0A1W2PQ67 120 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 HACD1B0YJ81 288 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 LZTS3O60299 673 aaPredicted RBP13.07□□□□□ -0.32
CNOT1-213ENST00000568158 OPHN1O60890 802 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 ALPIP09923 528 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 THEGLP0DJG4 465 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 C6P13671 934 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 SDHBP21912 280 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 CD68P34810 354 aaPredicted RBP13.07□□□□□ -0.32
CNOT1-213ENST00000568158 MMP12P39900 470 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 EIF3EP60228 445 aaKnown RBP13.07□□□□□ -0.32
CNOT1-213ENST00000568158 XRCC4Q13426 336 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 PUM1Q14671 1186 aaKnown RBP eCLIP13.07□□□□□ -0.32
CNOT1-213ENST00000568158 RPS6KA1Q15418 735 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 IL27RAQ6UWB1 636 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 Q6ZSR6 202 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 DPPA4Q7L190 304 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 KDELC2Q7Z4H8 507 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 OR13H1Q8NG92 308 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 SPATA22Q8NHS9 363 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 HTR3CQ8WXA8 447 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 SKA1Q96BD8 255 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 CENPTQ96BT3 561 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 TEKT5Q96M29 485 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 QKIQ96PU8 341 aaKnown RBP eCLIP13.07□□□□□ -0.322e-10■■■□□ 19.2
CNOT1-213ENST00000568158 RTKNQ9BST9 563 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 SLC25A51Q9H1U9 297 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 DNAAF2Q9NVR5 837 aaKnown RBP13.07□□□□□ -0.32
CNOT1-213ENST00000568158 TRMT1Q9NXH9 659 aaKnown RBP13.07□□□□□ -0.32
CNOT1-213ENST00000568158 PPIL1Q9Y3C6 166 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 TDRD6O60522 2096 aaKnown RBP13.07□□□□□ -0.32
CNOT1-213ENST00000568158 DMXL1Q9Y485 3027 aa13.07□□□□□ -0.32
CNOT1-213ENST00000568158 F5H423 210 aaPredicted RBP13.06□□□□□ -0.32
CNOT1-213ENST00000568158 MT-CYBP00156 380 aaPredicted RBP13.06□□□□□ -0.32
CNOT1-213ENST00000568158 RBP3P10745 1247 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 CD59P13987 128 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 GM2AP17900 193 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 HNF1BP35680 557 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 EPHB1P54762 984 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 NXPH1P58417 271 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 BNIP3Q12983 259 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 ZNF423Q2M1K9 1284 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 WSCD2Q2TBF2 565 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 DENND2CQ68D51 928 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 DARS2Q6PI48 645 aaKnown RBP13.06□□□□□ -0.32
CNOT1-213ENST00000568158 ABI3BPQ7Z7G0 1075 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 TSPAN33Q86UF1 283 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 IQCHQ86VS3 1027 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 ZNF567Q8N184 647 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 CBARPQ8N350 705 aaPredicted RBP13.06□□□□□ -0.32
CNOT1-213ENST00000568158 TP53I13Q8NBR0 393 aaPredicted RBP13.06□□□□□ -0.32
CNOT1-213ENST00000568158 SPOCK2Q92563 424 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 SCRN2Q96FV2 425 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 IMP4Q96G21 291 aaKnown RBP13.06□□□□□ -0.32
CNOT1-213ENST00000568158 TDRD1Q9BXT4 1180 aaKnown RBP13.06□□□□□ -0.32
CNOT1-213ENST00000568158 PCDH9Q9HC56 1237 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 TM7SF3Q9NS93 570 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 HAUS2Q9NVX0 235 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 UBP1Q9NZI7 540 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 METRNQ9UJH8 293 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 FNDC3AQ9Y2H6 1198 aaKnown RBP13.06□□□□□ -0.32
CNOT1-213ENST00000568158 R3HDM2Q9Y2K5 976 aaKnown RBP13.06□□□□□ -0.32
CNOT1-213ENST00000568158 CABIN1Q9Y6J0 2220 aa13.06□□□□□ -0.32
CNOT1-213ENST00000568158 TP53BP1Q12888 1972 aaPredicted RBP13.05□□□□□ -0.32
CNOT1-213ENST00000568158 CFAP69A5D8W1 941 aa13.05□□□□□ -0.32
CNOT1-213ENST00000568158 NPIPB15A6NHN6 443 aaPredicted RBP13.05□□□□□ -0.32
CNOT1-213ENST00000568158 FPGTO14772 594 aa13.05□□□□□ -0.32
CNOT1-213ENST00000568158 RECQL5O94762 991 aaPredicted RBP13.05□□□□□ -0.32
CNOT1-213ENST00000568158 CER1O95813 267 aa13.05□□□□□ -0.32
CNOT1-213ENST00000568158 CYP2A6P11509 494 aaPredicted RBP13.05□□□□□ -0.32
CNOT1-213ENST00000568158 NFKB1P19838 968 aa13.05□□□□□ -0.32
CNOT1-213ENST00000568158 VIPR1P32241 457 aa13.05□□□□□ -0.32
CNOT1-213ENST00000568158 IGFALSP35858 605 aa13.05□□□□□ -0.32
CNOT1-213ENST00000568158 IL9RQ01113 521 aa13.05□□□□□ -0.32
CNOT1-213ENST00000568158 KLF1Q13351 362 aaPredicted RBP13.05□□□□□ -0.32
CNOT1-213ENST00000568158 ACOX1Q15067 660 aa13.05□□□□□ -0.32
CNOT1-213ENST00000568158 SHBQ15464 509 aa13.05□□□□□ -0.32
CNOT1-213ENST00000568158 PCSK7Q16549 785 aa13.05□□□□□ -0.32
CNOT1-213ENST00000568158 CRTC1Q6UUV9 634 aa13.05□□□□□ -0.32
CNOT1-213ENST00000568158 RFLNAQ6ZTI6 216 aa13.05□□□□□ -0.32
CNOT1-213ENST00000568158 ZSCAN30Q86W11 494 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms