RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 TEX44Q53QW1 395 aa21.75■■□□□ 1.07
NME3-210ENST00000567271 CCDC181Q5TID7 509 aa21.75■■□□□ 1.07
NME3-210ENST00000567271 PIH1D2Q8WWB5 315 aa21.75■■□□□ 1.07
NME3-210ENST00000567271 ANP32BQ92688 251 aaKnown RBP21.75■■□□□ 1.07
NME3-210ENST00000567271 AGAP3Q96P47 875 aa21.75■■□□□ 1.07
NME3-210ENST00000567271 TDRD1Q9BXT4 1180 aaKnown RBP21.75■■□□□ 1.07
NME3-210ENST00000567271 TM7SF3Q9NS93 570 aa21.75■■□□□ 1.07
NME3-210ENST00000567271 PPP2R2CQ9Y2T4 447 aa21.75■■□□□ 1.07
NME3-210ENST00000567271 PPIL1Q9Y3C6 166 aa21.75■■□□□ 1.07
NME3-210ENST00000567271 POM121BA6NF01 834 aa21.74■■□□□ 1.07
NME3-210ENST00000567271 FPGTO14772 594 aa21.74■■□□□ 1.07
NME3-210ENST00000567271 MTSS1O43312 755 aa21.74■■□□□ 1.07
NME3-210ENST00000567271 TJP3O95049 919 aa21.74■■□□□ 1.07
NME3-210ENST00000567271 PTPN3P26045 913 aa21.74■■□□□ 1.07
NME3-210ENST00000567271 SKOR1P84550 965 aa21.74■■□□□ 1.07
NME3-210ENST00000567271 WASHC5Q12768 1159 aa21.74■■□□□ 1.07
NME3-210ENST00000567271 NOMO1Q15155 1222 aa21.74■■□□□ 1.07
NME3-210ENST00000567271 PRAMEF14Q5SWL7 426 aa21.74■■□□□ 1.07
NME3-210ENST00000567271 KYAT3Q6YP21 454 aaKnown RBP21.74■■□□□ 1.07
NME3-210ENST00000567271 DGLUCYQ7Z3D6 616 aa21.74■■□□□ 1.07
NME3-210ENST00000567271 OR13H1Q8NG92 308 aa21.74■■□□□ 1.07
NME3-210ENST00000567271 SCRN2Q96FV2 425 aa21.74■■□□□ 1.07
NME3-210ENST00000567271 TEKT5Q96M29 485 aa21.74■■□□□ 1.07
NME3-210ENST00000567271 QKIQ96PU8 341 aaKnown RBP eCLIP21.74■■□□□ 1.07
NME3-210ENST00000567271 ELF4Q99607 663 aaPredicted RBP21.74■■□□□ 1.07
NME3-210ENST00000567271 C1QTNF7Q9BXJ2 289 aa21.74■■□□□ 1.07
NME3-210ENST00000567271 ERVMER34-1Q9H9K5 563 aa21.74■■□□□ 1.07
NME3-210ENST00000567271 B4GALT6Q9UBX8 382 aa21.74■■□□□ 1.07
NME3-210ENST00000567271 COQ6Q9Y2Z9 468 aa21.74■■□□□ 1.07
NME3-210ENST00000567271 A6NNZ2 444 aa21.73■■□□□ 1.07
NME3-210ENST00000567271 CA4P22748 312 aa21.73■■□□□ 1.07
NME3-210ENST00000567271 NFKBIAP25963 317 aa21.73■■□□□ 1.07
NME3-210ENST00000567271 CD86P42081 329 aa21.73■■□□□ 1.07
NME3-210ENST00000567271 OTUD4Q01804 1114 aaKnown RBP21.73■■□□□ 1.07
NME3-210ENST00000567271 AGERQ15109 404 aa21.73■■□□□ 1.07
NME3-210ENST00000567271 LIPIQ6XZB0 460 aa21.73■■□□□ 1.07
NME3-210ENST00000567271 Q6ZSR6 202 aa21.73■■□□□ 1.07
NME3-210ENST00000567271 PIP4P1Q86T03 277 aa21.73■■□□□ 1.07
NME3-210ENST00000567271 TP53I13Q8NBR0 393 aaPredicted RBP21.73■■□□□ 1.07
NME3-210ENST00000567271 ACTL9Q8TC94 416 aa21.73■■□□□ 1.07
NME3-210ENST00000567271 HTR3CQ8WXA8 447 aa21.73■■□□□ 1.07
NME3-210ENST00000567271 IMP4Q96G21 291 aaKnown RBP21.73■■□□□ 1.07
NME3-210ENST00000567271 MCCC1Q96RQ3 725 aaPredicted RBP21.73■■□□□ 1.07
NME3-210ENST00000567271 SLC25A51Q9H1U9 297 aa21.73■■□□□ 1.07
NME3-210ENST00000567271 PCDHGB2Q9Y5G2 931 aa21.73■■□□□ 1.07
NME3-210ENST00000567271 A0A1B0GTQ1 180 aa21.72■■□□□ 1.07
NME3-210ENST00000567271 A8MX80 341 aa21.72■■□□□ 1.07
NME3-210ENST00000567271 LZTS3O60299 673 aaPredicted RBP21.72■■□□□ 1.07
NME3-210ENST00000567271 PRLP01236 227 aa21.72■■□□□ 1.07
NME3-210ENST00000567271 ELFN1P0C7U0 828 aa21.72■■□□□ 1.07
NME3-210ENST00000567271 CSRP1P21291 193 aaKnown RBP21.72■■□□□ 1.07
NME3-210ENST00000567271 VIPR1P32241 457 aa21.72■■□□□ 1.07
NME3-210ENST00000567271 SHBQ15464 509 aa21.72■■□□□ 1.07
NME3-210ENST00000567271 MEI1Q5TIA1 1274 aa21.72■■□□□ 1.07
NME3-210ENST00000567271 DBX2Q6ZNG2 339 aa21.72■■□□□ 1.07
NME3-210ENST00000567271 DCP2Q8IU60 420 aaKnown RBP21.72■■□□□ 1.07
NME3-210ENST00000567271 NDUFAF2Q8N183 169 aa21.72■■□□□ 1.07
NME3-210ENST00000567271 SLC22A18ASQ8N1D0 253 aa21.72■■□□□ 1.07
NME3-210ENST00000567271 PDLIM2Q96JY6 352 aa21.72■■□□□ 1.07
NME3-210ENST00000567271 GLOD4Q9HC38 313 aa21.72■■□□□ 1.07
NME3-210ENST00000567271 PCDH9Q9HC56 1237 aa21.72■■□□□ 1.07
NME3-210ENST00000567271 MBNL1Q9NR56 388 aaKnown RBP21.72■■□□□ 1.07
NME3-210ENST00000567271 GPR27Q9NS67 375 aa21.72■■□□□ 1.07
NME3-210ENST00000567271 CHKBQ9Y259 395 aa21.72■■□□□ 1.07
NME3-210ENST00000567271 CNOT1A5YKK6 2376 aaKnown RBP21.72■■□□□ 1.07
NME3-210ENST00000567271 TMEM131Q92545 1883 aa21.71■■□□□ 1.07
NME3-210ENST00000567271 CABIN1Q9Y6J0 2220 aa21.71■■□□□ 1.07
NME3-210ENST00000567271 H7C0C1 242 aa21.71■■□□□ 1.07
NME3-210ENST00000567271 CYP2A6P11509 494 aaPredicted RBP21.71■■□□□ 1.07
NME3-210ENST00000567271 CTPS1P17812 591 aa21.71■■□□□ 1.07
NME3-210ENST00000567271 IGFALSP35858 605 aa21.71■■□□□ 1.07
NME3-210ENST00000567271 RABIFP47224 123 aa21.71■■□□□ 1.07
NME3-210ENST00000567271 ATP5OP48047 213 aa21.71■■□□□ 1.07
NME3-210ENST00000567271 CCT8P50990 548 aa21.71■■□□□ 1.07
NME3-210ENST00000567271 PFN3P60673 137 aa21.71■■□□□ 1.07
NME3-210ENST00000567271 RPL26P61254 145 aaKnown RBP21.71■■□□□ 1.07
NME3-210ENST00000567271 LRRC14Q15048 493 aa21.71■■□□□ 1.07
NME3-210ENST00000567271 PTPRRQ15256 657 aa21.71■■□□□ 1.07
NME3-210ENST00000567271 WSCD2Q2TBF2 565 aa21.71■■□□□ 1.07
NME3-210ENST00000567271 USP45Q70EL2 814 aa21.71■■□□□ 1.07
NME3-210ENST00000567271 PTAR1Q7Z6K3 402 aaPredicted RBP21.71■■□□□ 1.07
NME3-210ENST00000567271 CBARPQ8N350 705 aaPredicted RBP21.71■■□□□ 1.07
NME3-210ENST00000567271 OXR1Q8N573 874 aa21.71■■□□□ 1.07
NME3-210ENST00000567271 TADA1Q96BN2 335 aa21.71■■□□□ 1.07
NME3-210ENST00000567271 ALS2CR12Q96Q35 445 aa21.71■■□□□ 1.07
NME3-210ENST00000567271 RBM15Q96T37 977 aaKnown RBP eCLIP21.71■■□□□ 1.07
NME3-210ENST00000567271 VAT1Q99536 393 aa21.71■■□□□ 1.07
NME3-210ENST00000567271 C10orf88Q9H8K7 445 aa21.71■■□□□ 1.07
NME3-210ENST00000567271 RPL26L1Q9UNX3 145 aaKnown RBP21.71■■□□□ 1.07
NME3-210ENST00000567271 A0A0J9YYE9 177 aa21.7■■□□□ 1.06
NME3-210ENST00000567271 NPIPB15A6NHN6 443 aaPredicted RBP21.7■■□□□ 1.06
NME3-210ENST00000567271 PCDHGA12O60330 932 aa21.7■■□□□ 1.06
NME3-210ENST00000567271 RECQL5O94762 991 aaPredicted RBP21.7■■□□□ 1.06
NME3-210ENST00000567271 HEXIM1O94992 359 aaKnown RBP21.7■■□□□ 1.06
NME3-210ENST00000567271 KCNK5O95279 499 aa21.7■■□□□ 1.06
NME3-210ENST00000567271 TRBC1P01850 177 aa21.7■■□□□ 1.06
NME3-210ENST00000567271 ALPIP09923 528 aa21.7■■□□□ 1.06
NME3-210ENST00000567271 GM2AP17900 193 aa21.7■■□□□ 1.06
NME3-210ENST00000567271 LHCGRP22888 699 aa21.7■■□□□ 1.06
NME3-210ENST00000567271 RBL1P28749 1068 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms