RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 CRTAMO95727 393 aa30.71■■■□□ 2.51
CTCF-203ENST00000566078 CTSLP07711 333 aa30.71■■■□□ 2.51
CTCF-203ENST00000566078 ABL2P42684 1182 aa30.71■■■□□ 2.51
CTCF-203ENST00000566078 SEC13P55735 322 aa30.71■■■□□ 2.51
CTCF-203ENST00000566078 PON2Q15165 354 aa30.71■■■□□ 2.51
CTCF-203ENST00000566078 ARSIQ5FYB1 569 aa30.71■■■□□ 2.51
CTCF-203ENST00000566078 EMC10Q5UCC4 262 aa30.71■■■□□ 2.51
CTCF-203ENST00000566078 PPM1NQ8N819 430 aa30.71■■■□□ 2.51
CTCF-203ENST00000566078 MDGA1Q8NFP4 955 aa30.71■■■□□ 2.51
CTCF-203ENST00000566078 MAFAQ8NHW3 353 aaPredicted RBP30.71■■■□□ 2.51
CTCF-203ENST00000566078 EZH1Q92800 747 aaPredicted RBP30.71■■■□□ 2.51
CTCF-203ENST00000566078 C20orf96Q9NUD7 363 aaPredicted RBP30.71■■■□□ 2.51
CTCF-203ENST00000566078 CACNA2D2Q9NY47 1150 aa30.71■■■□□ 2.51
CTCF-203ENST00000566078 KCTD3Q9Y597 815 aa30.71■■■□□ 2.51
CTCF-203ENST00000566078 F5P12259 2224 aa30.71■■■□□ 2.51
CTCF-203ENST00000566078 LOC730098B7Z3J9 87 aa30.7■■■□□ 2.51
CTCF-203ENST00000566078 CDH16O75309 829 aa30.7■■■□□ 2.51
CTCF-203ENST00000566078 PAPSS2O95340 614 aaPredicted RBP30.7■■■□□ 2.51
CTCF-203ENST00000566078 SLC4A1P02730 911 aa30.7■■■□□ 2.51
CTCF-203ENST00000566078 ALPIP09923 528 aa30.7■■■□□ 2.51
CTCF-203ENST00000566078 ERVK-10P10266 1014 aa30.7■■■□□ 2.51
CTCF-203ENST00000566078 PAMP19021 973 aa30.7■■■□□ 2.51
CTCF-203ENST00000566078 PFKPQ01813 784 aa30.7■■■□□ 2.51
CTCF-203ENST00000566078 MGAT5Q09328 741 aa30.7■■■□□ 2.51
CTCF-203ENST00000566078 PTPRRQ15256 657 aa30.7■■■□□ 2.51
CTCF-203ENST00000566078 TTMPQ5BVD1 217 aa30.7■■■□□ 2.51
CTCF-203ENST00000566078 C9orf64Q5T6V5 341 aa30.7■■■□□ 2.51
CTCF-203ENST00000566078 STK40Q8N2I9 435 aa30.7■■■□□ 2.51
CTCF-203ENST00000566078 ZNF513Q8N8E2 541 aaPredicted RBP30.7■■■□□ 2.51
CTCF-203ENST00000566078 OSBPL1AQ9BXW6 950 aa30.7■■■□□ 2.51
CTCF-203ENST00000566078 FAM53CQ9NYF3 392 aa30.7■■■□□ 2.51
CTCF-203ENST00000566078 HACD3Q9P035 362 aa30.7■■■□□ 2.51
CTCF-203ENST00000566078 BCCIPQ9P287 314 aaKnown RBP eCLIP30.7■■■□□ 2.51
CTCF-203ENST00000566078 A0A0J9YYE9 177 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 RGS16O15492 202 aaPredicted RBP30.69■■■□□ 2.5
CTCF-203ENST00000566078 TRBC1P01850 177 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 HNRNPLP14866 589 aaKnown RBP eCLIP30.69■■■□□ 2.5
CTCF-203ENST00000566078 MSH2P43246 934 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 TDGQ13569 410 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 TAF1AQ15573 450 aaPredicted RBP30.69■■■□□ 2.5
CTCF-203ENST00000566078 CNGA3Q16281 694 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 KIAA0930Q6ICG6 404 aaPredicted RBP30.69■■■□□ 2.5
CTCF-203ENST00000566078 KCNMB4Q86W47 210 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 CDKL2Q92772 493 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 LRIG1Q96JA1 1093 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 PSMC3IPQ9P2W1 217 aaPredicted RBP30.69■■■□□ 2.5
CTCF-203ENST00000566078 PHTF1Q9UMS5 762 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 A0A1W2PQ67 120 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 GOLGA8KD6RF30 607 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 AURKAO14965 403 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 BUD23O43709 281 aaKnown RBP30.69■■■□□ 2.5
CTCF-203ENST00000566078 IER5LQ5T953 404 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 PDPK2PQ6A1A2 396 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 ZNF449Q6P9G9 518 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 LRRC6Q86X45 466 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 TDRPQ86YL5 185 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 RIBC1Q8N443 379 aaPredicted RBP30.69■■■□□ 2.5
CTCF-203ENST00000566078 OR13J1Q8NGT2 312 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 OR8D1Q8WZ84 308 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 DHRS4Q9BTZ2 278 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 SLC17A6Q9P2U8 582 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 TBK1Q9UHD2 729 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 ZNF711Q9Y462 761 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 STON1Q9Y6Q2 735 aa30.69■■■□□ 2.5
CTCF-203ENST00000566078 EPHX1P07099 455 aa30.68■■■□□ 2.5
CTCF-203ENST00000566078 SRFP11831 508 aa30.68■■■□□ 2.5
CTCF-203ENST00000566078 E2F5Q15329 346 aa30.68■■■□□ 2.5
CTCF-203ENST00000566078 TMED2Q15363 201 aa30.68■■■□□ 2.5
CTCF-203ENST00000566078 SKIDA1Q1XH10 827 aa30.68■■■□□ 2.5
CTCF-203ENST00000566078 SLC44A1Q8WWI5 657 aa30.68■■■□□ 2.5
CTCF-203ENST00000566078 MAGEE1Q9HCI5 957 aa30.68■■■□□ 2.5
CTCF-203ENST00000566078 EURLQ9NYK6 297 aa30.68■■■□□ 2.5
CTCF-203ENST00000566078 ZFATQ9P243 1243 aa30.68■■■□□ 2.5
CTCF-203ENST00000566078 SUN2Q9UH99 717 aa30.68■■■□□ 2.5
CTCF-203ENST00000566078 IKBKGQ9Y6K9 419 aa30.68■■■□□ 2.5
CTCF-203ENST00000566078 CAPN8A6NHC0 703 aa30.67■■■□□ 2.5
CTCF-203ENST00000566078 C2orf81A6NN90 581 aa30.67■■■□□ 2.5
CTCF-203ENST00000566078 VAPBO95292 243 aa30.67■■■□□ 2.5
CTCF-203ENST00000566078 EGFP01133 1207 aa30.67■■■□□ 2.5
CTCF-203ENST00000566078 TIE1P35590 1138 aa30.67■■■□□ 2.5
CTCF-203ENST00000566078 KIR2DL1P43626 348 aaPredicted RBP30.67■■■□□ 2.5
CTCF-203ENST00000566078 ZNF140P52738 457 aaPredicted RBP30.67■■■□□ 2.5
CTCF-203ENST00000566078 ELAVL3Q14576 367 aaKnown RBP30.67■■■□□ 2.5
CTCF-203ENST00000566078 TMEM196Q5HYL7 178 aa30.67■■■□□ 2.5
CTCF-203ENST00000566078 FSTL4Q6MZW2 842 aa30.67■■■□□ 2.5
CTCF-203ENST00000566078 CHPFQ8IZ52 775 aa30.67■■■□□ 2.5
CTCF-203ENST00000566078 DCAKDQ8WVC6 231 aa30.67■■■□□ 2.5
CTCF-203ENST00000566078 PGM2Q96G03 612 aa30.67■■■□□ 2.5
CTCF-203ENST00000566078 DNAJC1Q96KC8 554 aaKnown RBP30.67■■■□□ 2.5
CTCF-203ENST00000566078 SLC2A4RGQ9NR83 387 aa30.67■■■□□ 2.5
CTCF-203ENST00000566078 LGALS13Q9UHV8 139 aa30.67■■■□□ 2.5
CTCF-203ENST00000566078 NPC1O15118 1278 aa30.66■■■□□ 2.5
CTCF-203ENST00000566078 PRNPP04156 253 aa30.66■■■□□ 2.5
CTCF-203ENST00000566078 INHBAP08476 426 aa30.66■■■□□ 2.5
CTCF-203ENST00000566078 WASP42768 502 aa30.66■■■□□ 2.5
CTCF-203ENST00000566078 TMPRSS15P98073 1019 aa30.66■■■□□ 2.5
CTCF-203ENST00000566078 PTPRCAPQ14761 206 aa30.66■■■□□ 2.5
CTCF-203ENST00000566078 HSP90AA5PQ58FG0 334 aa30.66■■■□□ 2.5
CTCF-203ENST00000566078 AGBL2Q5U5Z8 902 aa30.66■■■□□ 2.5
CTCF-203ENST00000566078 BRAT1Q6PJG6 821 aa30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms