RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 YBEYP58557 167 aaPredicted RBP12.84□□□□□ -0.35
RNF40-208ENST00000565995 FOXK1P85037 733 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 SERINC3Q13530 473 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 C16orf72Q14CZ0 275 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 CCDC14Q49A88 953 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 RAB6CQ53S08 254 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 EFHC2Q5JST6 749 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 STRADAQ7RTN6 431 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 PIM3Q86V86 326 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 Q8N9G6 341 aaPredicted RBP12.84□□□□□ -0.35
RNF40-208ENST00000565995 FAM46DQ8NEK8 389 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 OR56A4Q8NGH8 313 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 NTAN1Q96AB6 310 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 TBC1D31Q96DN5 1066 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 PDXPQ96GD0 296 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 ZNF641Q96N77 438 aaPredicted RBP12.84□□□□□ -0.35
RNF40-208ENST00000565995 TAAR9Q96RI9 348 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 MAGEB5Q9BZ81 275 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 RAB6CQ9H0N0 254 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 SUV39H2Q9H5I1 410 aa12.84□□□□□ -0.35
RNF40-208ENST00000565995 BIN1O00499 593 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 INSIG1O15503 277 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 BUB1O43683 1085 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 PLEKP08567 350 aaPredicted RBP12.83□□□□□ -0.36
RNF40-208ENST00000565995 CR2P20023 1033 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 CASRP41180 1078 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 STAT1P42224 750 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 CSNK1DP48730 415 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 LIG3P49916 1009 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 NOMO3P69849 1222 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 ATP11AP98196 1134 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 KCNAB2Q13303 367 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 TRA2AQ13595 282 aaKnown RBP eCLIP12.83□□□□□ -0.36
RNF40-208ENST00000565995 ARHGEF7Q14155 803 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 CYTH1Q15438 398 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 C2CD6Q53TS8 623 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 SPECC1LQ69YQ0 1117 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 RWDD4Q6NW29 188 aaKnown RBP12.83□□□□□ -0.36
RNF40-208ENST00000565995 BRAT1Q6PJG6 821 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 SASS6Q6UVJ0 657 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 LEKR1Q6ZMV7 388 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 TAF8Q7Z7C8 310 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 DNAAF5Q86Y56 855 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 SFTPA2Q8IWL1 248 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 PLA2G15Q8NCC3 412 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 MSANTD4Q8NCY6 345 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 OR1E3Q8WZA6 343 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 FUBP1Q96AE4 644 aaKnown RBP12.83□□□□□ -0.36
RNF40-208ENST00000565995 NAA15Q9BXJ9 866 aaKnown RBP12.83□□□□□ -0.36
RNF40-208ENST00000565995 KLC2Q9H0B6 622 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 EPN3Q9H201 632 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 FGF22Q9HCT0 170 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 PCDH12Q9NPG4 1184 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 WDR70Q9NW82 654 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 LHX3Q9UBR4 397 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 ANAPC2Q9UJX6 822 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 DAAM1Q9Y4D1 1078 aa12.83□□□□□ -0.36
RNF40-208ENST00000565995 CACNA1DQ01668 2161 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 C2CD4BA6NLJ0 364 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 WASH4PA8MWX3 477 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 GOLGA8SH3BPF8 625 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 CAPN5O15484 640 aaPredicted RBP12.82□□□□□ -0.36
RNF40-208ENST00000565995 BUB1BO60566 1050 aaPredicted RBP12.82□□□□□ -0.36
RNF40-208ENST00000565995 FGF3P11487 239 aaPredicted RBP12.82□□□□□ -0.36
RNF40-208ENST00000565995 CCL4P13236 92 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 KELP23276 732 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 GPR3P46089 330 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 ATP1A2P50993 1020 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 POLE2P56282 527 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 RHOAP61586 193 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 C15orf59Q2T9L4 293 aaPredicted RBP12.82□□□□□ -0.36
RNF40-208ENST00000565995 UMODL1-AS1Q8N2C9 162 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 EMC1Q8N766 993 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 RTL3Q8N8U3 475 aaKnown RBP12.82□□□□□ -0.36
RNF40-208ENST00000565995 RXFP2Q8WXD0 754 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 CATSPER2Q96P56 530 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 TUBGCP5Q96RT8 1024 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 ANP32EQ9BTT0 268 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 SPRY4Q9C004 299 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 TMEM168Q9H0V1 697 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 PDCL3Q9H2J4 239 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 AKAP7Q9P0M2 348 aaPredicted RBP12.82□□□□□ -0.36
RNF40-208ENST00000565995 UNC79Q9P2D8 2635 aa12.82□□□□□ -0.36
RNF40-208ENST00000565995 CENPEQ02224 2701 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 IGHV5-10-1A0A0J9YXX1 117 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 CACNB4O00305 520 aaPredicted RBP12.81□□□□□ -0.36
RNF40-208ENST00000565995 ZW10O43264 779 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 PIGNO95427 931 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 CYP1A1P04798 512 aaPredicted RBP12.81□□□□□ -0.36
RNF40-208ENST00000565995 FGF1P05230 155 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 GM2AP17900 193 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 MMP8P22894 467 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 XPAP23025 273 aaPredicted RBP12.81□□□□□ -0.36
RNF40-208ENST00000565995 CD1CP29017 333 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 SDC4P31431 198 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 LIMK2P53671 638 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 HDAC4P56524 1084 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 RALGDSQ12967 914 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 TCEA2Q15560 299 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 TSR1Q2NL82 804 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms