RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 MAFO75444 373 aaPredicted RBP13.66□□□□□ -0.22
CX3CL1-204ENST00000565912 KHDRBS3O75525 346 aaKnown RBP13.66□□□□□ -0.22
CX3CL1-204ENST00000565912 CYP1A2P05177 515 aa13.66□□□□□ -0.22
CX3CL1-204ENST00000565912 ELFN1P0C7U0 828 aa13.66□□□□□ -0.22
CX3CL1-204ENST00000565912 OMPP47874 163 aa13.66□□□□□ -0.22
CX3CL1-204ENST00000565912 ADAMTSL2Q86TH1 951 aa13.66□□□□□ -0.22
CX3CL1-204ENST00000565912 OR7A2PQ8NGA2 310 aa13.66□□□□□ -0.22
CX3CL1-204ENST00000565912 OR8D1Q8WZ84 308 aa13.66□□□□□ -0.22
CX3CL1-204ENST00000565912 BAP1Q92560 729 aa13.66□□□□□ -0.22
CX3CL1-204ENST00000565912 LINGO1Q96FE5 620 aa13.66□□□□□ -0.22
CX3CL1-204ENST00000565912 MRPL57Q9BQC6 102 aaKnown RBP13.66□□□□□ -0.22
CX3CL1-204ENST00000565912 SPAG4Q9NPE6 437 aa13.66□□□□□ -0.22
CX3CL1-204ENST00000565912 IMP3Q9NV31 184 aaKnown RBP13.66□□□□□ -0.22
CX3CL1-204ENST00000565912 SSNA1O43805 119 aa13.66□□□□□ -0.22
CX3CL1-204ENST00000565912 AVILO75366 819 aa13.66□□□□□ -0.22
CX3CL1-204ENST00000565912 DBTP11182 482 aaKnown RBP13.66□□□□□ -0.22
CX3CL1-204ENST00000565912 DDR1Q08345 913 aa13.66□□□□□ -0.22
CX3CL1-204ENST00000565912 RHOBTB2Q9BYZ6 727 aa13.66□□□□□ -0.22
CX3CL1-204ENST00000565912 CRNNQ9UBG3 495 aaPredicted RBP13.66□□□□□ -0.22
CX3CL1-204ENST00000565912 LIN7AO14910 233 aaPredicted RBP13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 CST1P01037 141 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 MC4RP32245 332 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 PYDC2Q56P42 97 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 TAPT1Q6NXT6 567 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 METTL3Q86U44 580 aaKnown RBP13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 AADATQ8N5Z0 425 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 NETO2Q8NC67 525 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 FAM98AQ8NCA5 519 aaKnown RBP13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 OR4A15Q8NGL6 344 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 TBC1D30Q9Y2I9 924 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 PCDHB9Q9Y5E1 797 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 SLC15A5A6NIM6 579 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 INHBEP58166 350 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 DCLRE1AQ6PJP8 1040 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 CREG2Q8IUH2 290 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 OR4L1Q8NH43 312 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 TEX47Q8TBZ9 253 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 PTCD3Q96EY7 689 aaKnown RBP13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 TLR5O60602 858 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 SERPINB7O75635 380 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 SHBGP04278 402 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 HNRNPLP14866 589 aaKnown RBP eCLIP13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 ERCC2P18074 760 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 CAPSQ13938 189 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 PLA2G4EQ3MJ16 856 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 DEPDC4Q8N2C3 294 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 TSEN2Q8NCE0 465 aaKnown RBP13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 MCRS1Q96EZ8 462 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 COPS8Q99627 209 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 GULP1Q9UBP9 304 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 PHF11Q9UIL8 331 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 FAM92AA1XBS5 289 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 NEDD8-MDP1E9PL57 170 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 AP5Z1O43299 807 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 GABRR2P28476 465 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 RPL9P32969 192 aaKnown RBP13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 CDK18Q07002 472 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 LSM12Q3MHD2 195 aaKnown RBP13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 GPR142Q7Z601 462 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 MAB21L3Q8N8X9 362 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 GLIS3Q8NEA6 775 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 HDAC10Q969S8 669 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 CLIC5Q9NZA1 410 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 C3orf18Q9UK00 162 aa13.65□□□□□ -0.22
CX3CL1-204ENST00000565912 ATP6AP2A0A1C7CYW4 349 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 RFXANKO14593 260 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 ATP6AP2O75787 350 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 CAMK1Q14012 370 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 BROXQ5VW32 411 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 LRRC49Q8IUZ0 686 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 C12orf29Q8N999 325 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 ZNF563Q8TA94 476 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 MTMR9Q96QG7 549 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 MBD2Q9UBB5 411 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 SAMHD1Q9Y3Z3 626 aaKnown RBP13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 GPC6Q9Y625 555 aaPredicted RBP13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 PSMD10O75832 226 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 OR5F1O95221 314 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 MYL9P24844 172 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 GTF2BQ00403 316 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 NT5DC1Q5TFE4 455 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 TXNDC11Q6PKC3 985 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 ZNF607Q96SK3 696 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 ZNF304Q9HCX3 659 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 C15orf41Q9Y2V0 281 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 SALL3Q9BXA9 1300 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 TCEA3O75764 348 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 PIAS1O75925 651 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 GJB1P08034 283 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 TFPIP10646 304 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 ADSSP30520 456 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 MAP2K5Q13163 448 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 UBAP2LQ14157 1087 aaKnown RBP13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 TSC22D1Q15714 1073 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 LRRC38Q5VT99 294 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 TRIM40Q6P9F5 258 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 TNS4Q8IZW8 715 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 LRRN4CLQ8ND94 238 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 CKAP2Q8WWK9 683 aa13.64□□□□□ -0.23
CX3CL1-204ENST00000565912 MCMBPQ9BTE3 642 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms