RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 BRSK1Q8TDC3 778 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 CXorf40AQ8TE69 158 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.82□□□□□ -1.16
CDH1-208ENST00000565810 NUP205Q92621 2012 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 FMO2Q99518 471 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 NAT9Q9BTE0 207 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 GPR63Q9BZJ6 419 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 BTBD1Q9H0C5 482 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 SLC6A17Q9H1V8 727 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 NEUROG2Q9H2A3 272 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 EPHX3Q9H6B9 360 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 ANKZF1Q9H8Y5 726 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 ZFYVE1Q9HBF4 777 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 SGK2Q9HBY8 427 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 MAGEE1Q9HCI5 957 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 CD248Q9HCU0 757 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 PCDH12Q9NPG4 1184 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 ITM2CQ9NQX7 267 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 PIH1D1Q9NWS0 290 aaKnown RBP7.82□□□□□ -1.16
CDH1-208ENST00000565810 GRHL1Q9NZI5 618 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.82□□□□□ -1.16
CDH1-208ENST00000565810 DLGAP2Q9P1A6 1054 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 SAMD15Q9P1V8 674 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 B4GALT6Q9UBX8 382 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 EBF1Q9UH73 591 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 FZD4Q9ULV1 537 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 NFU1Q9UMS0 254 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 COL4A3Q01955 1670 aa7.82□□□□□ -1.16
CDH1-208ENST00000565810 TBC1D3DA0A087WVF3 549 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 TBC1D3IA0A087WXS9 549 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 TBC1D3EA0A087X179 549 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 TBC1D3KA0A087X1G2 549 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 C1orf232A0A0U1RR37 186 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 HEATR9A2RTY3 570 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 TBC1D3FA6NER0 549 aaPredicted RBP7.81□□□□□ -1.16
CDH1-208ENST00000565810 CAPN8A6NHC0 703 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 LRRC72A6NJI9 287 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 TBC1D3LB9A6J9 549 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 BHMG1C9JSJ3 638 aaPredicted RBP7.81□□□□□ -1.16
CDH1-208ENST00000565810 AXIN1O15169 862 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 TSPAN6O43657 245 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 AP1G1O43747 822 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 LZTS3O60299 673 aaPredicted RBP7.81□□□□□ -1.16
CDH1-208ENST00000565810 PCDH8O95206 1070 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 PRKCGP05129 697 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 ALPIP09923 528 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 TBC1D3HP0C7X1 549 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 ZNF30P17039 623 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 LPOP22079 712 aaPredicted RBP7.81□□□□□ -1.16
CDH1-208ENST00000565810 MGAT1P26572 445 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 TNFRSF8P28908 595 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 DRD3P35462 400 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 P2RY2P41231 377 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 TPMTP51580 245 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 DHX9Q08211 1270 aaKnown RBP7.81□□□□□ -1.16
CDH1-208ENST00000565810 PDIA2Q13087 525 aaKnown RBP7.81□□□□□ -1.16
CDH1-208ENST00000565810 SEPT6Q14141 434 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 POU6F1Q14863 301 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 SLMAPQ14BN4 828 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 TRADDQ15628 312 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 SKIDA1Q1XH10 827 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 MAP9Q49MG5 647 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 USP39Q53GS9 565 aaKnown RBP7.81□□□□□ -1.16
CDH1-208ENST00000565810 PCID2Q5JVF3 399 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 CERCAMQ5T4B2 595 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 PIP5KL1Q5T9C9 394 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 DENND2CQ68D51 928 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 TBC1D3GQ6DHY5 549 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 TBC1D3CQ6IPX1 549 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 DENND5AQ6IQ26 1287 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 WDR93Q6P2C0 686 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 ZDHHC24Q6UX98 284 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 CCNI2Q6ZMN8 369 aaPredicted RBP7.81□□□□□ -1.16
CDH1-208ENST00000565810 DPPA4Q7L190 304 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 CAND1Q86VP6 1230 aaKnown RBP7.81□□□□□ -1.16
CDH1-208ENST00000565810 RASSF3Q86WH2 238 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 CCDC25Q86WR0 208 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 CCNJLQ8IV13 435 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 PALM2Q8IXS6 379 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 TBC1D3Q8IZP1 549 aaPredicted RBP7.81□□□□□ -1.16
CDH1-208ENST00000565810 AADATQ8N5Z0 425 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 DTWD2Q8NBA8 298 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 MDGA1Q8NFP4 955 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 MYRIPQ8NFW9 859 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 PTCD2Q8WV60 388 aaKnown RBP7.81□□□□□ -1.16
CDH1-208ENST00000565810 VOPP1Q96AW1 172 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 LRRC39Q96DD0 335 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 SPACA7Q96KW9 195 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 MCCC1Q96RQ3 725 aaPredicted RBP7.81□□□□□ -1.16
CDH1-208ENST00000565810 RANBP9Q96S59 729 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 LYSMD1Q96S90 227 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 PARD6BQ9BYG5 372 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 PHACTR1Q9C0D0 580 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 EPC1Q9H2F5 836 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 KDM4CQ9H3R0 1056 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 RAD18Q9NS91 495 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 ZDHHC18Q9NUE0 388 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 C2orf42Q9NWW7 574 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 PKP3Q9Y446 797 aa7.81□□□□□ -1.16
CDH1-208ENST00000565810 ZNF711Q9Y462 761 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms