RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 SPPL3Q8TCT6 385 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 GPBAR1Q8TDU6 330 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 POMGNT1Q8WZA1 660 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 TNFRSF25Q93038 417 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 CCDC51Q96ER9 411 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 WDFY2Q96P53 400 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 C1orf43Q9BWL3 253 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 MOV10L1Q9BXT6 1211 aaKnown RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 RAD21L1Q9H4I0 556 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 KIF9Q9HAQ2 790 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 GPN1Q9HCN4 374 aaPredicted RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 RAB9BQ9NP90 201 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 GDAP2Q9NXN4 497 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 TRPM5Q9NZQ8 1165 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 KLHL8Q9P2G9 620 aaPredicted RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 LPAR3Q9UBY5 353 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 TTC7AQ9ULT0 858 aaPredicted RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 STAP1Q9ULZ2 295 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 PACSIN2Q9UNF0 486 aaPredicted RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 EXOC6BQ9Y2D4 811 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 HBS1LQ9Y450 684 aaKnown RBP3.11□□□□□ -1.91
CHD9-216ENST00000565803 NPFFR2Q9Y5X5 522 aa3.11□□□□□ -1.91
CHD9-216ENST00000565803 ARHGAP42A6NI28 874 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 GRM8O00222 908 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 CYR61O00622 381 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 MEFVO15553 781 aaPredicted RBP3.1□□□□□ -1.91
CHD9-216ENST00000565803 KCNQ3O43525 872 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 VPS4BO75351 444 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 RNF8O76064 485 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 ATE1O95260 518 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 LCA5LO95447 670 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 LY86O95711 162 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 CLTAP09496 248 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 APEHP13798 732 aaKnown RBP3.1□□□□□ -1.91
CHD9-216ENST00000565803 RPA2P15927 270 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 NFKB1P19838 968 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 DDCP20711 480 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 G0S2P27469 103 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 MAPKAPK2P49137 400 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 CLCN4P51793 760 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 ARHGAP8P85298 464 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 DSC2Q02487 901 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 PCDH1Q08174 1060 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 POU4F2Q12837 409 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 KCNAB2Q13303 367 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 TUSC3Q13454 348 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 KRT33BQ14525 404 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 FAM189A2Q15884 450 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 LEXMQ3ZCV2 418 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 PLA2G4FQ68DD2 849 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 DUS1LQ6P1R4 473 aaKnown RBP3.1□□□□□ -1.91
CHD9-216ENST00000565803 DEGS2Q6QHC5 323 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 SARM1Q6SZW1 724 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 MOXD1Q6UVY6 613 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 RRM2BQ7LG56 351 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 IQCHQ86VS3 1027 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 SERPINA12Q8IW75 414 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 LRRC34Q8IZ02 419 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 ENDOVQ8N8Q3 282 aaKnown RBP3.1□□□□□ -1.91
CHD9-216ENST00000565803 FAM133AQ8N9E0 248 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 ATAD1Q8NBU5 361 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 OR14C36Q8NHC7 312 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 RHBDD1Q8TEB9 315 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 PRPF31Q8WWY3 499 aaKnown RBP3.1□□□□□ -1.91
CHD9-216ENST00000565803 MR1Q95460 341 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 SLC22A18Q96BI1 424 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 AP2M1Q96CW1 435 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 TMX3Q96JJ7 454 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 KCNS3Q9BQ31 491 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 REEP2Q9BRK0 252 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.1□□□□□ -1.91
CHD9-216ENST00000565803 SHCBP1LQ9BZQ2 653 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 ZNF518BQ9C0D4 1074 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 CCSER1Q9C0I3 900 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 MFFQ9GZY8 342 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 R3HDMLQ9H3Y0 253 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 ZNF576Q9H609 170 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 RMND5AQ9H871 391 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 RPF1Q9H9Y2 349 aaKnown RBP3.1□□□□□ -1.91
CHD9-216ENST00000565803 NTN4Q9HB63 628 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 A1CFQ9NQ94 594 aaKnown RBP3.1□□□□□ -1.91
CHD9-216ENST00000565803 PAG1Q9NWQ8 432 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 PI4KBQ9UBF8 816 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 CD300AQ9UGN4 299 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 TEX13CA0A0J9YWL9 993 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 PMS2P1A4D2B8 440 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 PRAMEF25A6NGN4 478 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 TUBAL3A6NHL2 446 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 PCP4L1A6NKN8 68 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 TMEM233B4DJY2 109 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 E9PMD0 336 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 SMIM22K7EJ46 135 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 XPO1O14980 1071 aaKnown RBP3.1□□□□□ -1.91
CHD9-216ENST00000565803 AKR7A2O43488 359 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 DCXO43602 365 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 PCDH8O95206 1070 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 TGM6O95932 706 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 FYNP06241 537 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 FESP07332 822 aa3.1□□□□□ -1.91
CHD9-216ENST00000565803 ZNF865P0CJ78 1059 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms