RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 LMO7DNF2Z398 122 aa16.82■□□□□ 0.28
USB1-211ENST00000565662 TNFRSF10CO14798 259 aa16.82■□□□□ 0.28
USB1-211ENST00000565662 ANXA6P08133 673 aa16.82■□□□□ 0.28
USB1-211ENST00000565662 ZNF30P17039 623 aa16.82■□□□□ 0.28
USB1-211ENST00000565662 CR2P20023 1033 aa16.82■□□□□ 0.28
USB1-211ENST00000565662 RPL26P61254 145 aaKnown RBP16.82■□□□□ 0.28
USB1-211ENST00000565662 SLC10A7Q0GE19 358 aa16.82■□□□□ 0.28
USB1-211ENST00000565662 DNAJC3Q13217 504 aa16.82■□□□□ 0.28
USB1-211ENST00000565662 ARHGEF7Q14155 803 aa16.82■□□□□ 0.28
USB1-211ENST00000565662 TCEAL1Q15170 157 aa16.82■□□□□ 0.28
USB1-211ENST00000565662 CCDC157Q569K6 752 aa16.82■□□□□ 0.28
USB1-211ENST00000565662 ANKRD20A8PQ5CZ79 823 aa16.82■□□□□ 0.28
USB1-211ENST00000565662 ARMC12Q5T9G4 340 aa16.82■□□□□ 0.28
USB1-211ENST00000565662 HES3Q5TGS1 186 aa16.82■□□□□ 0.28
USB1-211ENST00000565662 ESRP1Q6NXG1 681 aaKnown RBP16.82■□□□□ 0.28
USB1-211ENST00000565662 GKN2Q86XP6 184 aa16.82■□□□□ 0.28
USB1-211ENST00000565662 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.82■□□□□ 0.28
USB1-211ENST00000565662 HDAC11Q96DB2 347 aa16.82■□□□□ 0.28
USB1-211ENST00000565662 WDR92Q96MX6 357 aa16.82■□□□□ 0.28
USB1-211ENST00000565662 DEPDC7Q96QD5 511 aa16.82■□□□□ 0.28
USB1-211ENST00000565662 DDX56Q9NY93 547 aaKnown RBP16.82■□□□□ 0.28
USB1-211ENST00000565662 RPL26L1Q9UNX3 145 aaKnown RBP16.82■□□□□ 0.28
USB1-211ENST00000565662 CLCA2Q9UQC9 943 aa16.82■□□□□ 0.28
USB1-211ENST00000565662 PLXNB3Q9ULL4 1909 aa16.82■□□□□ 0.28
USB1-211ENST00000565662 SHROOM3Q8TF72 1996 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 K7ESM1 405 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 TRIM38O00635 465 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 MATN3O15232 486 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 FFAR2O15552 330 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 BUB1BO60566 1050 aaPredicted RBP16.81■□□□□ 0.28
USB1-211ENST00000565662 IPO7O95373 1038 aaKnown RBP16.81■□□□□ 0.28
USB1-211ENST00000565662 CTSEP14091 401 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 TSHRP16473 764 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 TEAD1P28347 426 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 VIPR1P32241 457 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 RGRP47804 291 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 ARSEP51690 589 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 HK3P52790 923 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 NR0B2Q15466 257 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 C6orf132Q5T0Z8 1188 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 FAXCQ5TGI0 409 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 LIPIQ6XZB0 460 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 CCDC170Q8IYT3 715 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 MAML1Q92585 1016 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 BTBD6Q96KE9 485 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 APOLD1Q96LR9 279 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 APOOQ9BUR5 198 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 MAK16Q9BXY0 300 aaKnown RBP16.81■□□□□ 0.28
USB1-211ENST00000565662 KLQ9UEF7 1012 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 DGKBQ9Y6T7 804 aa16.81■□□□□ 0.28
USB1-211ENST00000565662 LRRK1Q38SD2 2015 aa16.8■□□□□ 0.28
USB1-211ENST00000565662 PPP1R12AO14974 1030 aaPredicted RBP16.8■□□□□ 0.28
USB1-211ENST00000565662 TCEA3O75764 348 aa16.8■□□□□ 0.28
USB1-211ENST00000565662 PEX11BO96011 259 aa16.8■□□□□ 0.28
USB1-211ENST00000565662 TCF4P15884 667 aa16.8■□□□□ 0.28
USB1-211ENST00000565662 EIF2B5Q13144 721 aaKnown RBP16.8■□□□□ 0.28
USB1-211ENST00000565662 WSCD2Q2TBF2 565 aa16.8■□□□□ 0.28
USB1-211ENST00000565662 PRRT3Q5FWE3 981 aa16.8■□□□□ 0.28
USB1-211ENST00000565662 LRRC73Q5JTD7 316 aa16.8■□□□□ 0.28
USB1-211ENST00000565662 NCBP2-AS2Q69YL0 99 aa16.8■□□□□ 0.28
USB1-211ENST00000565662 ARHGAP36Q6ZRI8 547 aa16.8■□□□□ 0.28
USB1-211ENST00000565662 LSMEM2Q8N112 164 aa16.8■□□□□ 0.28
USB1-211ENST00000565662 SLC35G2Q8TBE7 412 aa16.8■□□□□ 0.28
USB1-211ENST00000565662 LMX1AQ8TE12 382 aa16.8■□□□□ 0.28
USB1-211ENST00000565662 SCRN2Q96FV2 425 aa16.8■□□□□ 0.28
USB1-211ENST00000565662 TRIM5Q9C035 493 aa16.8■□□□□ 0.28
USB1-211ENST00000565662 ABCG4Q9H172 646 aa16.8■□□□□ 0.28
USB1-211ENST00000565662 WDR26Q9H7D7 661 aa16.8■□□□□ 0.28
USB1-211ENST00000565662 PHPT1Q9NRX4 125 aaPredicted RBP16.8■□□□□ 0.28
USB1-211ENST00000565662 ETNK2Q9NVF9 386 aa16.8■□□□□ 0.28
USB1-211ENST00000565662 UCKL1Q9NWZ5 548 aa16.8■□□□□ 0.28
USB1-211ENST00000565662 PPIL1Q9Y3C6 166 aa16.8■□□□□ 0.28
USB1-211ENST00000565662 TDRD6O60522 2096 aaKnown RBP16.8■□□□□ 0.28
USB1-211ENST00000565662 SRRM3A6NNA2 597 aaPredicted RBP16.79■□□□□ 0.28
USB1-211ENST00000565662 ZW10O43264 779 aa16.79■□□□□ 0.28
USB1-211ENST00000565662 MFSD11O43934 449 aa16.79■□□□□ 0.28
USB1-211ENST00000565662 RECQL5O94762 991 aaPredicted RBP16.79■□□□□ 0.28
USB1-211ENST00000565662 PGLSO95336 258 aa16.79■□□□□ 0.28
USB1-211ENST00000565662 TNFP01375 233 aa16.79■□□□□ 0.28
USB1-211ENST00000565662 IL4RP24394 825 aa16.79■□□□□ 0.28
USB1-211ENST00000565662 CYLC1P35663 651 aaPredicted RBP16.79■□□□□ 0.28
USB1-211ENST00000565662 GJC1P36383 396 aa16.79■□□□□ 0.28
USB1-211ENST00000565662 EPHB1P54762 984 aa16.79■□□□□ 0.28
USB1-211ENST00000565662 HADHBP55084 474 aaKnown RBP16.79■□□□□ 0.28
USB1-211ENST00000565662 RALGDSQ12967 914 aa16.79■□□□□ 0.28
USB1-211ENST00000565662 CAMK2BQ13554 666 aa16.79■□□□□ 0.28
USB1-211ENST00000565662 INPP5AQ14642 412 aa16.79■□□□□ 0.28
USB1-211ENST00000565662 TXNRD3NBQ6F5E7 133 aa16.79■□□□□ 0.28
USB1-211ENST00000565662 RHOT1Q8IXI2 618 aa16.79■□□□□ 0.28
USB1-211ENST00000565662 DCBLD1Q8N8Z6 715 aa16.79■□□□□ 0.28
USB1-211ENST00000565662 RNF214Q8ND24 703 aa16.79■□□□□ 0.28
USB1-211ENST00000565662 PDCD6IPQ8WUM4 868 aaKnown RBP16.79■□□□□ 0.28
USB1-211ENST00000565662 NUS1Q96E22 293 aa16.79■□□□□ 0.28
USB1-211ENST00000565662 MCCC1Q96RQ3 725 aaPredicted RBP16.79■□□□□ 0.28
USB1-211ENST00000565662 LRRC61Q9BV99 259 aa16.79■□□□□ 0.28
USB1-211ENST00000565662 BOCQ9BWV1 1114 aa16.79■□□□□ 0.28
USB1-211ENST00000565662 EME2A4GXA9 379 aaPredicted RBP16.78■□□□□ 0.28
USB1-211ENST00000565662 TRABD2BA6NFA1 517 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 MUSKO15146 869 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 PSTPIP1O43586 416 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms